RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 ETV7Q9Y603 341 aa4.74□□□□□ -1.65
PRKDC-208ENST00000536710 TEX264Q9Y6I9 313 aa4.74□□□□□ -1.65
PRKDC-208ENST00000536710 A0A087WZ39 114 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 SLC15A5A6NIM6 579 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 VTNP04004 478 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 TYMPP19971 482 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 GJB2P29033 226 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 SOX3P41225 446 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 LEPRP48357 1165 aaKnown RBP4.73□□□□□ -1.65
PRKDC-208ENST00000536710 CASP9P55211 416 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 HUNKP57058 714 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 KCNK10P57789 538 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 BTG1P62324 171 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 GRB14Q14449 540 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 KRT31Q15323 416 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 SGSM1Q2NKQ1 1148 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 LYPLAL1Q5VWZ2 237 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 TATDN1Q6P1N9 297 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 MEX3BQ6ZN04 569 aaKnown RBP4.73□□□□□ -1.65
PRKDC-208ENST00000536710 Q6ZSR9 355 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 CHMP1BQ7LBR1 199 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 TEX26Q8N6G2 289 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 DDHD1Q8NEL9 900 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 OR13C5Q8NGS8 318 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 URGCPQ8TCY9 931 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 MAPK15Q8TD08 544 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 GATAD1Q8WUU5 269 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 ZNRF4Q8WWF5 429 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 HAS2Q92819 552 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 OMA1Q96E52 524 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 ZNF274Q96GC6 653 aaPredicted RBP4.73□□□□□ -1.65
PRKDC-208ENST00000536710 SPXQ9BT56 116 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 GPN1Q9HCN4 374 aaPredicted RBP4.73□□□□□ -1.65
PRKDC-208ENST00000536710 PRMT8Q9NR22 394 aaPredicted RBP4.73□□□□□ -1.65
PRKDC-208ENST00000536710 PSORS1C1Q9UIG5 152 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 PPP1R3CQ9UQK1 317 aa4.73□□□□□ -1.65
PRKDC-208ENST00000536710 FOXA2Q9Y261 457 aaPredicted RBP4.73□□□□□ -1.65
PRKDC-208ENST00000536710 STRAPQ9Y3F4 350 aaKnown RBP4.73□□□□□ -1.65
PRKDC-208ENST00000536710 SPAG9O60271 1321 aaKnown RBP4.72□□□□□ -1.65
PRKDC-208ENST00000536710 DOCK7Q96N67 2140 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 A0A1W2PR80 420 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 MAGEB2O15479 319 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 REC8O95072 547 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 GSTA2P09210 222 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 SKILP12757 684 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 GNB3P16520 340 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 ANOS1P23352 680 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 CLCN4P51793 760 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 SLC12A3P55017 1021 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 KRTAP10-11P60412 298 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 CNTN1Q12860 1018 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 PPP1R8Q12972 351 aaKnown RBP4.72□□□□□ -1.65
PRKDC-208ENST00000536710 GIT2Q14161 759 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 EFTUD2Q15029 972 aaKnown RBP eCLIP4.72□□□□□ -1.65
PRKDC-208ENST00000536710 PKN2Q16513 984 aaKnown RBP4.72□□□□□ -1.65
PRKDC-208ENST00000536710 TCEAL6Q6IPX3 200 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 B3GLCTQ6Y288 498 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 TMEM64Q6YI46 380 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 RFPL4BQ6ZWI9 263 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 ZNF619Q8N2I2 560 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 ELMOD1Q8N336 334 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 OR4A16Q8NH70 328 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 SLC35C1Q96A29 364 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 ZNF501Q96CX3 271 aaPredicted RBP4.72□□□□□ -1.65
PRKDC-208ENST00000536710 DTD2Q96FN9 168 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 CDHR1Q96JP9 859 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 RUNDC3BQ96NL0 473 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 PGLYRP2Q96PD5 576 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 PCDHB18PQ96TA0 734 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 TEX13AQ9BXU3 409 aaPredicted RBP4.72□□□□□ -1.65
PRKDC-208ENST00000536710 DGCR6LQ9BY27 220 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 TSPYL1Q9H0U9 437 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 TRMT6Q9UJA5 497 aaKnown RBP4.72□□□□□ -1.65
PRKDC-208ENST00000536710 EXOC7Q9UPT5 735 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 MRPS28Q9Y2Q9 187 aaKnown RBP4.72□□□□□ -1.65
PRKDC-208ENST00000536710 KIAA1210Q9ULL0 1709 aa4.72□□□□□ -1.65
PRKDC-208ENST00000536710 KRT87PA6NCN2 255 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 TLR4O00206 839 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 IKBKBO14920 756 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 SYT7O43581 403 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 KHDRBS3O75525 346 aaKnown RBP4.71□□□□□ -1.66
PRKDC-208ENST00000536710 CALCAP01258 141 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 ODC1P11926 461 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 B4GALT1P15291 398 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 AREGP15514 252 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 GAP43P17677 238 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 ITGB6P18564 788 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 CSNK2BP67870 215 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 GUCY2DQ02846 1103 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 SRSF9Q13242 221 aaKnown RBP eCLIP4.71□□□□□ -1.66
PRKDC-208ENST00000536710 TRA2AQ13595 282 aaKnown RBP eCLIP4.71□□□□□ -1.66
PRKDC-208ENST00000536710 FAM106AQ4KMX7 169 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 ZNF776Q68DI1 518 aaPredicted RBP4.71□□□□□ -1.66
PRKDC-208ENST00000536710 SNRNP48Q6IEG0 339 aaKnown RBP4.71□□□□□ -1.66
PRKDC-208ENST00000536710 PWWP2BQ6NUJ5 590 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 BHLHB9Q6PI77 547 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 STHQ8IWL8 128 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 SLC43A2Q8N370 569 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 FBXW8Q8N3Y1 598 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 DCLK2Q8N568 766 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms