RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 CALHM3Q86XJ0 350 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CLVS1Q8IUQ0 354 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 FAM9CQ8IZT9 166 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 FBXL6Q8N531 539 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 C2orf73Q8N5S3 287 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ZNF480Q8WV37 535 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TMBIM1Q969X1 311 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 MED8Q96G25 268 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 AURKBQ96GD4 344 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 MAGIXQ9H6Y5 334 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 FARSBQ9NSD9 589 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SLC25A37Q9NYZ2 338 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 USE1Q9NZ43 259 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DNAJB9Q9UBS3 223 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 APOBEC3BQ9UH17 382 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SH3GLB1Q9Y371 365 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CACNA1HO95180 2353 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 GPR179Q6PRD1 2367 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TRBV23OR9-2A0A075B6M9 112 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ELOVL7A1L3X0 281 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 COQ9O75208 318 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SEC22BO75396 215 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CLIC3O95833 236 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 THRBP10828 461 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PRPS2P11908 318 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 JUNBP17275 347 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 IDSP22304 550 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DCKP27707 260 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SLC6A12P48065 614 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CLDN8P56748 225 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 HMGCS1Q01581 520 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 EPS8Q12929 822 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 IMPG1Q17R60 797 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 UAP1L1Q3KQV9 507 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PRRT3Q5FWE3 981 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SPANXN4Q5MJ08 99 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TMEM214Q6NUQ4 689 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 AGTRAPQ6RW13 159 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SUSD1Q6UWL2 747 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 UNC5DQ6UXZ4 953 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SVOPLQ8N434 492 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ZBTB8BQ8NAP8 495 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 OR5K2Q8NHB8 316 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 NUDT8Q8WV74 236 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DNASE2BQ8WZ79 361 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PAIP1Q9H074 479 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 KCNH6Q9H252 994 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 FSCN3Q9NQT6 498 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ACSL5Q9ULC5 683 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SH2B3Q9UQQ2 575 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SLC22A14Q9Y267 594 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CROCCQ5TZA2 2017 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 KCNE1BA0A087WTH5 132 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 A6NCN8 305 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 FAM220BPB1ANY3 271 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TLR4O00206 839 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TOR1BO14657 336 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 FFAR3O14843 346 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 BCAT2O15382 392 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 GPR42O15529 346 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SDC3O75056 442 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SEC24DO94855 1032 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CPNE6O95741 557 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 MT-ND1P03886 318 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 BCKDHAP12694 445 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 HOXB9P17482 250 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 JUNDP17535 347 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SOX11P35716 441 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 GZMMP51124 257 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TBPL1P62380 186 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CBX3Q13185 183 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 NAE1Q13564 534 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 LYSMD4Q5XG99 296 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 MSANTD1Q6ZTZ1 278 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DCUN1D3Q8IWE4 304 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 MICU2Q8IYU8 434 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 OFCC1Q8IZS5 231 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 L3MBTL4Q8NA19 623 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 OR10A6Q8NH74 314 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 C12orf43Q96C57 262 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 FBXL8Q96CD0 374 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 MENTQ9BUN1 341 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 OSBPL10Q9BXB5 764 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 IKZF5Q9H5V7 419 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 KAT8Q9H7Z6 458 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CXorf21Q9HAI6 301 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TRNAU1APQ9NX07 287 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TMEM9Q9P0T7 183 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ADGRE2Q9UHX3 823 aa12.41□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ARID1BQ8NFD5 2236 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 A0A096LPI6 279 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 A0A1B0GVT2 93 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CXCR6O00574 342 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 GSTA4O15217 222 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TNFP01375 233 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 HNMTP50135 292 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 NXPH1P58417 271 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ILF3Q12906 894 aaKnown RBP eCLIP12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 C16orf72Q14CZ0 275 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 RPE65Q16518 533 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms