RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 C9orf139Q6ZV77 190 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 USP43Q70EL4 1123 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 ZNF329Q86UD4 541 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 SLC25A45Q8N413 288 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 SLC20A1Q8WUM9 679 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 UCMAQ8WVF2 138 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 ANKRD36BP1Q96IX9 119 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 METTL2AQ96IZ6 378 aaKnown RBP5.13□□□□□ -1.59
CLIP1-207ENST00000536634 PPP1R13BQ96KQ4 1090 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 NODALQ96S42 347 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 PIP5K1AQ99755 562 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 SNX25Q9H3E2 840 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 SMYD3Q9H7B4 428 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 SGK2Q9HBY8 427 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 PCDH9Q9HC56 1237 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 PREBQ9HCU5 417 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 DMAP1Q9NPF5 467 aaPredicted RBP5.13□□□□□ -1.59
CLIP1-207ENST00000536634 PRSS16Q9NQE7 514 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 LSM7Q9UK45 103 aaKnown RBP5.13□□□□□ -1.59
CLIP1-207ENST00000536634 NOL7Q9UMY1 257 aaKnown RBP5.13□□□□□ -1.59
CLIP1-207ENST00000536634 SATB2Q9UPW6 733 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 U3KQA8 63 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 F8P00451 2351 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 A8MXQ7 604 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 CDRT15L2A8MXV6 281 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 HHLA1C9JL84 531 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 VCYO14598 125 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 YKT6O15498 198 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 EPB41L2O43491 1005 aaKnown RBP5.12□□□□□ -1.59
CLIP1-207ENST00000536634 IGKV3-20P01619 116 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 IGLV2-11P01706 119 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 DNTTP04053 509 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 HMBSP08397 361 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 GIMD1P0DJR0 217 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 RARGP13631 454 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 CCDC130P13994 396 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 AMD1P17707 334 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 DDX5P17844 614 aaKnown RBP5.12□□□□□ -1.59
CLIP1-207ENST00000536634 BDKRB2P30411 391 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 HLA-FP30511 346 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 CORO1AP31146 461 aaKnown RBP5.12□□□□□ -1.59
CLIP1-207ENST00000536634 ATP5C1P36542 298 aaKnown RBP5.12□□□□□ -1.59
CLIP1-207ENST00000536634 ARRB1P49407 418 aaPredicted RBP5.12□□□□□ -1.59
CLIP1-207ENST00000536634 EIF3BP55884 814 aaKnown RBP5.12□□□□□ -1.59
CLIP1-207ENST00000536634 MAP3K7CLP57077 242 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 GOLGA8DPQ0D2H9 430 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 DRAP1Q14919 205 aaPredicted RBP5.12□□□□□ -1.59
CLIP1-207ENST00000536634 IGFBP7Q16270 282 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 KRTAP24-1Q3LI83 254 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 TTC31Q49AM3 519 aaPredicted RBP5.12□□□□□ -1.59
CLIP1-207ENST00000536634 KCTD18Q6PI47 426 aaPredicted RBP5.12□□□□□ -1.59
CLIP1-207ENST00000536634 KRBA2Q6ZNG9 492 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 ADIPOR2Q86V24 386 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 EXOC3L1Q86VI1 746 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 TMEM219Q86XT9 240 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 CBWD2Q8IUF1 395 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 CCDC83Q8IWF9 413 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 CCDC13Q8IYE1 715 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 LSMEM2Q8N112 164 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 WFDC5Q8TCV5 224 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 RAD54LQ92698 747 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 SMARCD1Q96GM5 515 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 ATXN7L3BQ96GX2 97 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 GRAMD2BQ96HH9 432 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 SERAC1Q96JX3 654 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 CMKLR1Q99788 373 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 SH3GL2Q99962 352 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 MED10Q9BTT4 135 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 SDCBP2Q9H190 292 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 ERVMER34-1Q9H9K5 563 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 SDF2L1Q9HCN8 221 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 TCF7L2Q9NQB0 619 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 TXLNGQ9NUQ3 528 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 FBXL12Q9NXK8 326 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 TBC1D7Q9P0N9 293 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 HMGXB4Q9UGU5 601 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 TTC7AQ9ULT0 858 aaPredicted RBP5.12□□□□□ -1.59
CLIP1-207ENST00000536634 CA5BQ9Y2D0 317 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 ZNF711Q9Y462 761 aa5.12□□□□□ -1.59
CLIP1-207ENST00000536634 HIVEP1P15822 2718 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 HIVEP3Q5T1R4 2406 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 NPIPB15A6NHN6 443 aaPredicted RBP5.11□□□□□ -1.59
CLIP1-207ENST00000536634 TTC36A6NLP5 189 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 GRID2O43424 1007 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 TNNC2P02585 160 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 IL7RP16871 459 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 ITGA2P17301 1181 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 S1PR1P21453 382 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 CCR10P46092 362 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 SGSHP51688 502 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 CASP6P55212 293 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 MYL6P60660 151 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 TNNC1P63316 161 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 FOXD4Q12950 439 aaPredicted RBP5.11□□□□□ -1.59
CLIP1-207ENST00000536634 TGIF1Q15583 401 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 ISXQ2M1V0 245 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 ZNF628Q5EBL2 1059 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 C10orf120Q5SQS8 335 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 C6orf141Q5SZD1 244 aa5.11□□□□□ -1.59
CLIP1-207ENST00000536634 ZNF776Q68DI1 518 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms