RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 COMMD6Q7Z4G1 85 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 PLD3Q8IV08 490 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 SLC5A8Q8N695 610 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 ZBTB8BQ8NAP8 495 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 OR10G2Q8NGC3 310 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 TAMM41Q96BW9 452 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 TCEAL4Q96EI5 215 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 THSD1Q9NS62 852 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 TMEM39AQ9NV64 488 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 SPASTQ9UBP0 616 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 POFUT2Q9Y2G5 429 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 DYRK1BQ9Y463 629 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 PSMD11O00231 422 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 GPR37L1O60883 481 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 SERPINB7O75635 380 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 IFNA14P01570 189 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 FURINP09958 794 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 C21orf33P30042 268 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 UGT2B10P36537 528 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 EPHA5P54756 1037 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 WDR5P61964 334 aaKnown RBP15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 TBPL1P62380 186 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 SCARB2Q14108 478 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 TBCEQ15813 527 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 ZNF852Q6ZMS4 543 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 OTOP2Q7RTS6 562 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 CFAP206Q8IYR0 622 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 OXR1Q8N573 874 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 DENND6BQ8NEG7 585 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 OR4C15Q8NGM1 316 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 RPL3LQ92901 407 aaKnown RBP15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 PPCDCQ96CD2 204 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 ITPKCQ96DU7 683 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 MTERF3Q96E29 417 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 SAMD11Q96NU1 681 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 SGPP1Q9BX95 441 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 FKBP14Q9NWM8 211 aa15.38■□□□□ 0.05
CHMP1A-202ENST00000535997 C6orf47O95873 294 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 BMP4P12644 408 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 VASPP50552 380 aaPredicted RBP15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 IFITM3Q01628 133 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 GRIN2CQ14957 1233 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 TEAD2Q15562 447 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 CRB2Q5IJ48 1285 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 Q6ZPB1 254 aaPredicted RBP15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 PAGE2Q7Z2X7 111 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 DEPDC4Q8N2C3 294 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 DNAJC22Q8N4W6 341 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 BTBD2Q9BX70 525 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 ARMC7Q9H6L4 198 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 DMRT3Q9NQL9 472 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 TAS2R9Q9NYW1 312 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 PCDHGA2Q9Y5H1 932 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 KRBA1A5PL33 1030 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 TMEM247A6NEH6 219 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 CDK1P06493 297 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 ALOX5P09917 674 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 LIPAP38571 399 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 CLK1P49759 484 aaKnown RBP15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 HMGA2P52926 109 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 C2orf80Q0P641 193 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 SLBPQ14493 270 aaKnown RBP eCLIP15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 ZNF630Q2M218 657 aaPredicted RBP15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 ARHGAP15Q53QZ3 475 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 C1orf53Q5VUE5 145 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 TMEM236Q5W0B7 351 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 UNC5DQ6UXZ4 953 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 OR9A1PQ8NGU1 263 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 C16orf78Q8WTQ4 265 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 GGHQ92820 318 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 TCF25Q9BQ70 676 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 RNF208Q9H0X6 261 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 MMP27Q9H306 513 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 MYNNQ9NPC7 610 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 ITM2CQ9NQX7 267 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 TRNAU1APQ9NX07 287 aaKnown RBP15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 MARK1Q9P0L2 795 aa15.37■□□□□ 0.05
CHMP1A-202ENST00000535997 AIREO43918 545 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 EFCAB14O75071 495 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 MOSPD3O75425 235 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 TGFB1P01137 390 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 OPN1SWP03999 348 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 PTPN2P17706 415 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 PBLDP30039 288 aaPredicted RBP15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 PIK3CBP42338 1070 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 OR1E2P47887 323 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 CDH12P55289 794 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 CDK6Q00534 326 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 EEF1A2Q05639 463 aaKnown RBP15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 SFSWAPQ12872 951 aaKnown RBP15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 BCL7AQ4VC05 210 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 PERM1Q5SV97 790 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 FAM71E1Q6IPT2 247 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 KIAA1958Q8N8K9 716 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 OR52J3Q8NH60 311 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 OTUB2Q96DC9 234 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 RAD9AQ99638 391 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 MTG2Q9H4K7 406 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 RLIMQ9NVW2 624 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms