RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 C7orf57Q8NEG2 295 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 B3GNT7Q8NFL0 401 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 FAM57AQ8TBR7 257 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 UTP15Q8TED0 518 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 ASB5Q8WWX0 329 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 TSLPQ969D9 159 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 PBKQ96KB5 322 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 HIST1H2AHQ96KK5 128 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 NAP1L3Q99457 506 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 HIST1H2AJQ99878 128 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 H2AFJQ9BTM1 129 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 HES7Q9BYE0 225 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 C20orf96Q9NUD7 363 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 TNFRSF10DQ9UBN6 386 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 NPIPA1Q9UND3 350 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 JRKLQ9Y4A0 524 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 PHF3Q92576 2039 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 FOXO6A8MYZ6 492 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 KLRC4-KLRK1H3BQV0 150 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 CES2O00748 559 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 FANCGO15287 622 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 CEP104O60308 925 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 UQCRHP07919 91 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 RNH1P13489 461 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 HSD17B7P56937 341 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 IL2P60568 153 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 REEP5Q00765 189 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 ACTN3Q08043 901 aaPredicted RBP10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 RGS1Q08116 209 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 TSTA3Q13630 321 aaPredicted RBP10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 E2F2Q14209 437 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 HYAL4Q2M3T9 481 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 CMPK2Q5EBM0 449 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 RNASEH2BQ5TBB1 312 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 TMEM211Q6ICI0 200 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 SBSNQ6UWP8 590 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 PALM2Q8IXS6 379 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 MYO1HQ8N1T3 1032 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 OR5T3Q8NGG3 340 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 OR8K3Q8NH51 312 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 ACTRT1Q8TDG2 376 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 CREB3L4Q8TEY5 395 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 SLC5A11Q8WWX8 675 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 ANP32BQ92688 251 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 NEIL2Q969S2 332 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 PEX11GQ96HA9 241 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 MACROD1Q9BQ69 325 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 MCMBPQ9BTE3 642 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 ATG10Q9H0Y0 220 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 EHD1Q9H4M9 534 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 CDCP1Q9H5V8 836 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 NT5DC2Q9H857 520 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 ZDHHC11Q9H8X9 412 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 PLAC1Q9HBJ0 212 aa10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 ZNF469Q96JG9 3925 aaPredicted RBP10.48□□□□□ -0.73
CLSTN3-206ENST00000535668 HCFC1P51610 2035 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 A0A1B0GVC2 190 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 OR14I1A6ND48 311 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 TMEM200CA6NKL6 621 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 FCHO1O14526 889 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 NDUFS4O43181 175 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 OR1F1O43749 312 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 ABOP16442 354 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 IVDP26440 423 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 HNMTP50135 292 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 CDKN2DP55273 166 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 DEFB134Q4QY38 66 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 CDKL4Q5MAI5 379 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 SPANXN3Q5MJ09 141 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 FCRLBQ6BAA4 426 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 ARHGAP11AQ6P4F7 1023 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 CCDC137Q6PK04 289 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 CPSF7Q8N684 471 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 ANKRD53Q8N9V6 530 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 TTLQ8NG68 377 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 MAGOHBQ96A72 148 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 TMEM125Q96AQ2 219 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 LRRC39Q96DD0 335 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 PTCHD1Q96NR3 888 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 TRIM54Q9BYV2 358 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 TP63Q9H3D4 680 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 KLHL1Q9NR64 748 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 ARL15Q9NXU5 204 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 KCNN3Q9UGI6 736 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 YARS2Q9Y2Z4 477 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 VWA7Q9Y334 891 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 PCDHGB3Q9Y5G1 929 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 HRH3Q9Y5N1 445 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 MAD1L1Q9Y6D9 718 aa10.47□□□□□ -0.73
CLSTN3-206ENST00000535668 PRRC2AP48634 2157 aaKnown RBP10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 GOLGA6L6A8MZA4 724 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 NRDCO43847 1150 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 DNAJB6O75190 326 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 TOXO94900 526 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 GLSO94925 669 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 IGHG3P01860 377 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 HOXD4P09016 255 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 MSX1P28360 303 aa10.46□□□□□ -0.73
CLSTN3-206ENST00000535668 CHRNB4P30926 498 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms