RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647		A8MUI8	341 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	GOLGA8K	D6RF30	607 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	GOLGA8T	H3BQL2	631 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647		H7BY64	318 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	EIF3F	O00303	357 aa	Predicted RBP	10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	DNALI1	O14645	258 aa	Predicted RBP	10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	ZBTB14	O43829	449 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	SEC24D	O94855	1032 aa	Predicted RBP	10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	ESRRA	P11474	423 aa	Predicted RBP	10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	PAM	P19021	973 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	XCR1	P46094	333 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	SNRPN	P63162	240 aa	Known RBP	10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	BASP1	P80723	227 aa	Known RBP	10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	TM4SF20	Q53R12	229 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	CES3	Q6UWW8	571 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	LANCL3	Q6ZV70	420 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	ANKRD37	Q7Z713	158 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	CCDC25	Q86WR0	208 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	BEST3	Q8N1M1	668 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	HORMAD2	Q8N7B1	307 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	AMER2	Q8N7J2	671 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	TMEM178A	Q8NBL3	297 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	PPFIBP2	Q8ND30	876 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	C14orf79	Q96F83	325 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	PRAP1	Q96NZ9	151 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	UTP23	Q9BRU9	249 aa	Known RBP	10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	PCBD2	Q9H0N5	130 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	GPAM	Q9HCL2	828 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	MEMO1	Q9Y316	297 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	DHRS7	Q9Y394	339 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	NEU2	Q9Y3R4	380 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	SLC22A7	Q9Y694	548 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	PKDREJ	Q9NTG1	2253 aa		10.87	□□□□□ -0.67
CTNND1-238	ENST00000534647	TACC2	O95359	2948 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	IGHV3-20	A0A0C4DH32	117 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	FAM237B	A0A1B0GVD1	139 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	GOLGA6L10	A6NI86	522 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	CLDN14	O95500	239 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	IMPA1	P29218	277 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	EEF1D	P29692	281 aa	Known RBP	10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	HSD17B3	P37058	310 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	SARNP	P82979	210 aa	Known RBP	10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	ALDH6A1	Q02252	535 aa	Known RBP	10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	TSTA3	Q13630	321 aa	Predicted RBP	10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	MORF4L2	Q15014	288 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	OR1C1	Q15619	314 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	KCTD19	Q17RG1	926 aa	Predicted RBP	10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	MINDY4	Q4G0A6	757 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	LRIG3	Q6UXM1	1119 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	ADCK2	Q7Z695	626 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	CRLF3	Q8IUI8	442 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	PLD3	Q8IV08	490 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	SIAH3	Q8IW03	269 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	LMNTD2	Q8IXW0	634 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	SLC5A8	Q8N695	610 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	CAMKV	Q8NCB2	501 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	GIMAP7	Q8NHV1	300 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	PHF10	Q8WUB8	498 aa	Known RBP	10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	FAM136A	Q96C01	138 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	MTFMT	Q96DP5	389 aa	Known RBP	10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	MAGED4	Q96JG8	741 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	PKNOX2	Q96KN3	472 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	SIGLEC12	Q96PQ1	595 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	OR1F2P	Q96R84	312 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	SLC30A3	Q99726	388 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	NPAS2	Q99743	824 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	TREX2	Q9BQ50	279 aa	Predicted RBP	10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	SARG	Q9BW04	601 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	TRIM45	Q9H8W5	580 aa	Predicted RBP	10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	KCNK13	Q9HB14	408 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	FAM53C	Q9NYF3	392 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	TINAG	Q9UJW2	476 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	HIVEP1	P15822	2718 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	HEATR5B	Q9P2D3	2071 aa		10.86	□□□□□ -0.67
CTNND1-238	ENST00000534647	C2CD3	Q4AC94	2353 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	CCDC168	Q8NDH2	2452 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	NCOA6	Q14686	2063 aa	Predicted RBP	10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	MAGEB17	A8MXT2	336 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	ASNA1	O43681	348 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	NEURL1	O76050	574 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	SP1	P08047	785 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	MLN	P12872	115 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	IVD	P26440	423 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	KIR3DL1	P43629	444 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	CSNK1G2	P78368	415 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	MPP1	Q00013	466 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	PMP22	Q01453	160 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	RHAG	Q02094	409 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	SRSF11	Q05519	484 aa	Known RBP	10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	IFFO1	Q0D2I5	559 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	TESK1	Q15569	626 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	THEMIS2	Q5TEJ8	643 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	SPINK14	Q6IE38	97 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	ZNF549	Q6P9A3	640 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	TRMT10C	Q7L0Y3	403 aa	Known RBP	10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	PRSS41	Q7RTY9	318 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	CAND1	Q86VP6	1230 aa	Known RBP	10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	PPIL6	Q8IXY8	311 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	ARMC10	Q8N2F6	343 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	ELP5	Q8TE02	316 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms