RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 SPATA6LQ8N4H0 392 aa8.36□□□□□ -1.07
COPB1-211ENST00000534234 ELP5Q8TE02 316 aa8.36□□□□□ -1.07
COPB1-211ENST00000534234 CREB3L4Q8TEY5 395 aa8.36□□□□□ -1.07
COPB1-211ENST00000534234 CDKL2Q92772 493 aa8.36□□□□□ -1.07
COPB1-211ENST00000534234 RHBDF1Q96CC6 855 aa8.36□□□□□ -1.07
COPB1-211ENST00000534234 SMIM10Q96HG1 83 aa8.36□□□□□ -1.07
COPB1-211ENST00000534234 ERP44Q9BS26 406 aa8.36□□□□□ -1.07
COPB1-211ENST00000534234 MCMBPQ9BTE3 642 aa8.36□□□□□ -1.07
COPB1-211ENST00000534234 CAPS2Q9BXY5 557 aa8.36□□□□□ -1.07
COPB1-211ENST00000534234 DERL2Q9GZP9 239 aa8.36□□□□□ -1.07
COPB1-211ENST00000534234 DPH5Q9H2P9 285 aa8.36□□□□□ -1.07
COPB1-211ENST00000534234 CDCP1Q9H5V8 836 aa8.36□□□□□ -1.07
COPB1-211ENST00000534234 POPDC3Q9HBV1 291 aa8.36□□□□□ -1.07
COPB1-211ENST00000534234 PYCARDQ9ULZ3 195 aa8.36□□□□□ -1.07
COPB1-211ENST00000534234 ICE1Q9Y2F5 2266 aa8.36□□□□□ -1.07
COPB1-211ENST00000534234 SPTBN1Q01082 2364 aaKnown RBP8.36□□□□□ -1.07
COPB1-211ENST00000534234 NOTCH2Q04721 2471 aa8.36□□□□□ -1.07
COPB1-211ENST00000534234 DOPEY1Q5JWR5 2465 aa8.36□□□□□ -1.07
COPB1-211ENST00000534234 A8MUA0 341 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 CXorf49A8MYA2 514 aaPredicted RBP8.35□□□□□ -1.07
COPB1-211ENST00000534234 FANCGO15287 622 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 CCDC166P0CW27 439 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 RNH1P13489 461 aaKnown RBP8.35□□□□□ -1.07
COPB1-211ENST00000534234 MAOAP21397 527 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 EEF1DP29692 281 aaKnown RBP8.35□□□□□ -1.07
COPB1-211ENST00000534234 SLC6A12P48065 614 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 STXBP1P61764 594 aaKnown RBP8.35□□□□□ -1.07
COPB1-211ENST00000534234 BTN3A2P78410 334 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 RBPJQ06330 500 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 TGFBIQ15582 683 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.35□□□□□ -1.071e-7■■■■□ 19.8
COPB1-211ENST00000534234 TOR1AIP1Q5JTV8 583 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 SP5Q6BEB4 398 aaPredicted RBP8.35□□□□□ -1.07
COPB1-211ENST00000534234 C3orf62Q6ZUJ4 267 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 CYS1Q717R9 158 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 MAATS1Q7Z4T9 603 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 LURAP1LQ8IV03 231 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 KIF2BQ8N4N8 673 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 HORMAD2Q8N7B1 307 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 MDS2Q8NDY4 140 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 ARMC2Q8NEN0 867 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 SPATA4Q8NEY3 305 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 CCT6BQ92526 530 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 TSPAN17Q96FV3 270 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 PDLIM2Q96JY6 352 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 FAR2Q96K12 515 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 HES7Q9BYE0 225 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 AICDAQ9GZX7 198 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 CAB39LQ9H9S4 337 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 SAYSD1Q9NPB0 183 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 PRDM9Q9NQV7 894 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 WHRNQ9P202 907 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 LRFN1Q9P244 771 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 TXNDC16Q9P2K2 825 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 PCM1Q15154 2024 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 POLEQ07864 2286 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 IGKV3D-11A0A0A0MRZ8 115 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 A0A0G2JN53 185 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 TCRBV9S1A1TA0A576 114 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 TCRBV16S1A1N1A0A5B0 115 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 LRIT2A6NDA9 550 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 FAM187AA6NFU0 413 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 ANKDD1BA6NHY2 528 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 C4orf51C9J302 202 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 CCL21O00585 134 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 EIF3HO15372 352 aaKnown RBP eCLIP8.35□□□□□ -1.07
COPB1-211ENST00000534234 TAPBPO15533 448 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 PHGDHO43175 533 aaKnown RBP8.35□□□□□ -1.07
COPB1-211ENST00000534234 NEURL1O76050 574 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 MLYCDO95822 493 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 SP1P08047 785 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 STMN1P16949 149 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 GGT5P36269 586 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 RUNX2Q13950 521 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 SLBPQ14493 270 aaKnown RBP eCLIP8.35□□□□□ -1.07
COPB1-211ENST00000534234 KRTCAP3Q53RY4 240 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 ZNF468Q5VIY5 522 aaPredicted RBP8.35□□□□□ -1.07
COPB1-211ENST00000534234 SLC25A25Q6KCM7 469 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 GALNTL5Q7Z4T8 443 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 GPSM1Q86YR5 675 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 SLC34A3Q8N130 599 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 LGI4Q8N135 537 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 KRT78Q8N1N4 520 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 CA13Q8N1Q1 262 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 TMEM178AQ8NBL3 297 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 NFAM1Q8NET5 270 aaPredicted RBP8.35□□□□□ -1.07
COPB1-211ENST00000534234 TTLQ8NG68 377 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 GAL3ST3Q96A11 431 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 ESAMQ96AP7 390 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 MS4A6EQ96DS6 147 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 SCMH1Q96GD3 660 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 CPNE1Q99829 537 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 DEFB126Q9BYW3 111 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 NT5DC2Q9H857 520 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 CNOT10Q9H9A5 744 aaKnown RBP8.35□□□□□ -1.07
COPB1-211ENST00000534234 NECTIN3Q9NQS3 549 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 COPG2Q9UBF2 871 aa8.35□□□□□ -1.07
COPB1-211ENST00000534234 TEX15Q9BXT5 2789 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 ASPDHA6ND91 283 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 SAGE2PA6NJ88 616 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms