RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 PDE10AQ9Y233 779 aa12.17□□□□□ -0.46
COPB1-209ENST00000533096 SNRNP200O75643 2136 aaKnown RBP12.17□□□□□ -0.46
COPB1-209ENST00000533096 PINLYPA6NC86 204 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 KLK8O60259 260 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 ITGA10O75578 1167 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 MYO1DO94832 1006 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 HAUS5O94927 633 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 HIST1H2AGP0C0S8 130 aaPredicted RBP12.16□□□□□ -0.46
COPB1-209ENST00000533096 ENO3P13929 434 aaPredicted RBP12.16□□□□□ -0.46
COPB1-209ENST00000533096 HIST1H2ADP20671 130 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 CCR8P51685 355 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 CLCN2P51788 898 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 DGKQP52824 942 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 DLX5P56178 289 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 FOXD4Q12950 439 aaPredicted RBP12.16□□□□□ -0.46
COPB1-209ENST00000533096 CCNG2Q16589 344 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 HECTD2Q5U5R9 776 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 KIAA0930Q6ICG6 404 aaPredicted RBP12.16□□□□□ -0.46
COPB1-209ENST00000533096 IL20RBQ6UXL0 311 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 ARMC2Q8NEN0 867 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 NFAM1Q8NET5 270 aaPredicted RBP12.16□□□□□ -0.46
COPB1-209ENST00000533096 ZNF669Q96BR6 464 aaPredicted RBP12.16□□□□□ -0.46
COPB1-209ENST00000533096 HIST1H2AHQ96KK5 128 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 HIST1H2AJQ99878 128 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 H2AFJQ9BTM1 129 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 INTS10Q9NVR2 710 aaKnown RBP12.16□□□□□ -0.46
COPB1-209ENST00000533096 PLEKHA6Q9Y2H5 1048 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 MED16Q9Y2X0 877 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 CAPN6Q9Y6Q1 641 aa12.16□□□□□ -0.46
COPB1-209ENST00000533096 MYOCOSA0A1B0GUC4 107 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 FAM237BA0A1B0GVD1 139 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 SAGE2PA6NJ88 616 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 GOLGA8MH3BSY2 632 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 DNASE1P24855 282 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 ZFP36L2P47974 494 aaKnown RBP12.15□□□□□ -0.46
COPB1-209ENST00000533096 SARNPP82979 210 aaKnown RBP12.15□□□□□ -0.46
COPB1-209ENST00000533096 RGS1Q08116 209 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 RBBP5Q15291 538 aaKnown RBP12.15□□□□□ -0.46
COPB1-209ENST00000533096 ZNF750Q32MQ0 723 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 CATSPEREQ5SY80 951 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 ARSKQ6UWY0 536 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 C4orf22Q6V702 233 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 LIX1LQ8IVB5 337 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 AFAP1L2Q8N4X5 818 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 TBC1D19Q8N5T2 526 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 ZFP62Q8NB50 900 aaPredicted RBP12.15□□□□□ -0.46
COPB1-209ENST00000533096 CD200R1Q8TD46 325 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 SNF8Q96H20 258 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 BAG1Q99933 345 aaPredicted RBP12.15□□□□□ -0.46
COPB1-209ENST00000533096 FAM129AQ9BZQ8 928 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 KLHL31Q9H511 634 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 PARVBQ9HBI1 364 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 PRDM9Q9NQV7 894 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 DEPPQ9NTK1 212 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 C20orf96Q9NUD7 363 aaPredicted RBP12.15□□□□□ -0.46
COPB1-209ENST00000533096 KLHL42Q9P2K6 505 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 TRMT6Q9UJA5 497 aaKnown RBP12.15□□□□□ -0.46
COPB1-209ENST00000533096 ACAD8Q9UKU7 415 aa12.15□□□□□ -0.46
COPB1-209ENST00000533096 MED13LQ71F56 2210 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 FAM221AA4D161 298 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 SDR42E2A6NKP2 422 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 CDK2AP1O14519 115 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 CTAG2O75638 210 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 OR2J2O76002 312 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 TUBB4AP04350 444 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 GLI4P10075 376 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 ACVR2AP27037 513 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 UQCRC1P31930 480 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 KIR2DL3P43628 341 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 SSR4P51571 173 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 SKP1P63208 163 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 PWP1Q13610 501 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 BMPR2Q13873 1038 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 CSHL1Q14406 222 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 SKOR2Q2VWA4 1001 aaPredicted RBP12.14□□□□□ -0.47
COPB1-209ENST00000533096 XKR6Q5GH73 641 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 LCTLQ6UWM7 567 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 ABHD13Q7L211 337 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 WDR53Q7Z5U6 358 aaPredicted RBP12.14□□□□□ -0.47
COPB1-209ENST00000533096 B3GNT7Q8NFL0 401 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 MYRIPQ8NFW9 859 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 GOT1L1Q8NHS2 421 aaPredicted RBP12.14□□□□□ -0.47
COPB1-209ENST00000533096 UTP15Q8TED0 518 aaKnown RBP12.14□□□□□ -0.47
COPB1-209ENST00000533096 KCNJ9Q92806 393 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 SMC6Q96SB8 1091 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 NDNQ99608 321 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 CCDC77Q9BR77 488 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 GPATCH1Q9BRR8 931 aaKnown RBP12.14□□□□□ -0.47
COPB1-209ENST00000533096 TTYH2Q9BSA4 534 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 HAUS8Q9BT25 410 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 CLEC4MQ9H2X3 399 aaPredicted RBP12.14□□□□□ -0.47
COPB1-209ENST00000533096 LDAHQ9H6V9 325 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 EXO5Q9H790 373 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 SLC24A3Q9HC58 644 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 ST6GALNAC2Q9UJ37 374 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 GUCA1BQ9UMX6 200 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 MAD1L1Q9Y6D9 718 aa12.14□□□□□ -0.47
COPB1-209ENST00000533096 ITPR3Q14573 2671 aa12.13□□□□□ -0.47
COPB1-209ENST00000533096 A0A0G2JN53 185 aa12.13□□□□□ -0.47
COPB1-209ENST00000533096 A0A0G2JNJ9 132 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms