RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 NSMCE4AQ9NXX6 385 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 DMGDHQ9UI17 866 aaKnown RBP16.74■□□□□ 0.27
SMG1-203ENST00000532700 MAST4O15021 2626 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 A8MUI8 341 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 SLC35E2BP0CK96 405 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 C1GALT1C1LP0DN25 315 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 COL8A1P27658 744 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 GP5P40197 560 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 HNRNPFP52597 415 aaKnown RBP16.73■□□□□ 0.27
SMG1-203ENST00000532700 IRF9Q00978 393 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 RGS1Q08116 209 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 NSDHLQ15738 373 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 H3F3CQ6NXT2 135 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 CYS1Q717R9 158 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 CRLF3Q8IUI8 442 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 CTAGE3PQ8IX95 158 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 CA13Q8N1Q1 262 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 PPM1NQ8N819 430 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 ST6GALNAC3Q8NDV1 305 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 PLPP5Q8NEB5 264 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 IFT81Q8WYA0 676 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 CDKL2Q92772 493 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 TBC1D20Q96BZ9 403 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 SIGLEC12Q96PQ1 595 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 OR1F2PQ96R84 312 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 AIF1LQ9BQI0 150 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 RHBGQ9H310 441 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 L2HGDHQ9H9P8 463 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 NECTIN3Q9NQS3 549 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 IGSF5Q9NSI5 407 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 ANKRD10Q9NXR5 420 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 PLEKHB1Q9UF11 243 aaPredicted RBP16.73■□□□□ 0.27
SMG1-203ENST00000532700 ZNF490Q9ULM2 529 aaPredicted RBP16.73■□□□□ 0.27
SMG1-203ENST00000532700 CLDN16Q9Y5I7 305 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 KCNE2Q9Y6J6 123 aa16.73■□□□□ 0.27
SMG1-203ENST00000532700 ZGRF1Q86YA3 2104 aa16.72■□□□□ 0.27
SMG1-203ENST00000532700 IGKV3D-11A0A0A0MRZ8 115 aa16.72■□□□□ 0.27
SMG1-203ENST00000532700 WIPF3A6NGB9 483 aa16.72■□□□□ 0.27
SMG1-203ENST00000532700 MAGEB17A8MXT2 336 aa16.72■□□□□ 0.27
SMG1-203ENST00000532700 PCDH17O14917 1159 aa16.72■□□□□ 0.27
SMG1-203ENST00000532700 MST1P26927 711 aa16.72■□□□□ 0.27
SMG1-203ENST00000532700 AGTR2P50052 363 aa16.72■□□□□ 0.27
SMG1-203ENST00000532700 SLC12A2P55011 1212 aa16.72■□□□□ 0.27
SMG1-203ENST00000532700 ILF2Q12905 390 aaKnown RBP16.72■□□□□ 0.27
SMG1-203ENST00000532700 BMPR2Q13873 1038 aa16.72■□□□□ 0.27
SMG1-203ENST00000532700 RUNX2Q13950 521 aa16.72■□□□□ 0.27
SMG1-203ENST00000532700 ZNF468Q5VIY5 522 aaPredicted RBP16.72■□□□□ 0.27
SMG1-203ENST00000532700 GPSM1Q86YR5 675 aa16.72■□□□□ 0.27
SMG1-203ENST00000532700 RP1L1Q8IWN7 2480 aaPredicted RBP16.72■□□□□ 0.27
SMG1-203ENST00000532700 ESPNB1AK53 854 aa16.71■□□□□ 0.27
SMG1-203ENST00000532700 SERPINA6P08185 405 aa16.71■□□□□ 0.27
SMG1-203ENST00000532700 STMN1P16949 149 aa16.71■□□□□ 0.27
SMG1-203ENST00000532700 PPP2R1BP30154 601 aa16.71■□□□□ 0.27
SMG1-203ENST00000532700 GGT5P36269 586 aa16.71■□□□□ 0.27
SMG1-203ENST00000532700 HNMTP50135 292 aa16.71■□□□□ 0.27
SMG1-203ENST00000532700 KCNK10P57789 538 aa16.71■□□□□ 0.27
SMG1-203ENST00000532700 SLC26A5P58743 744 aa16.71■□□□□ 0.27
SMG1-203ENST00000532700 RAB10P61026 200 aa16.71■□□□□ 0.27
SMG1-203ENST00000532700 RPUSD3Q6P087 351 aaKnown RBP16.71■□□□□ 0.27
SMG1-203ENST00000532700 IFT20Q8IY31 132 aa16.71■□□□□ 0.27
SMG1-203ENST00000532700 CENPLQ8N0S6 344 aaPredicted RBP16.71■□□□□ 0.27
SMG1-203ENST00000532700 MS4A6EQ96DS6 147 aa16.71■□□□□ 0.27
SMG1-203ENST00000532700 MRRFQ96E11 262 aaKnown RBP16.71■□□□□ 0.27
SMG1-203ENST00000532700 QRFPRQ96P65 431 aa16.71■□□□□ 0.27
SMG1-203ENST00000532700 ALG9Q9H6U8 611 aa16.71■□□□□ 0.27
SMG1-203ENST00000532700 STMN3Q9NZ72 180 aa16.71■□□□□ 0.27
SMG1-203ENST00000532700 WWOXQ9NZC7 414 aa16.71■□□□□ 0.27
SMG1-203ENST00000532700 PTBP2Q9UKA9 531 aaKnown RBP16.71■□□□□ 0.27
SMG1-203ENST00000532700 OSGIN2Q9Y236 505 aa16.71■□□□□ 0.27
SMG1-203ENST00000532700 SVILO95425 2214 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 DYTNA2CJ06 578 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 OR5H15A6NDH6 313 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 A8MUA0 341 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 UQCRHP07919 91 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 CYC1P08574 325 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 GNAZP19086 355 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 TFEBP19484 476 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 OR4D2P58180 307 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 BTN3A2P78410 334 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 TUBA3CQ13748 450 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 DOC2AQ14183 400 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 SLMAPQ14BN4 828 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 ACER2Q5QJU3 275 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 ABHD17BQ5VST6 288 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 TUBA3EQ6PEY2 450 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 TMIGD1Q6UXZ0 262 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 ABHD13Q7L211 337 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 ISCA2Q86U28 154 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 RNF175Q8N4F7 328 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 PDPRQ8NCN5 879 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 MDS2Q8NDY4 140 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 NFAM1Q8NET5 270 aaPredicted RBP16.7■□□□□ 0.26
SMG1-203ENST00000532700 TRPV3Q8NET8 790 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 KIAA1191Q96A73 305 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 TSPAN17Q96FV3 270 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 PTCHD1Q96NR3 888 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 ATOH8Q96SQ7 321 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 CSF3RQ99062 836 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 RNF32Q9H0A6 362 aa16.7■□□□□ 0.26
SMG1-203ENST00000532700 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.7■□□□□ 0.264e-6■□□□□ 8.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms