RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 TMEM35AQ53FP2 167 aa21.14■□□□□ 0.97
LRRK1-208ENST00000532029 PRSS41Q7RTY9 318 aa21.14■□□□□ 0.97
LRRK1-208ENST00000532029 RNF175Q8N4F7 328 aa21.14■□□□□ 0.97
LRRK1-208ENST00000532029 SRFBP1Q8NEF9 429 aaKnown RBP21.14■□□□□ 0.97
LRRK1-208ENST00000532029 OR2L5Q8NG80 312 aa21.14■□□□□ 0.97
LRRK1-208ENST00000532029 SELENOMQ8WWX9 145 aa21.14■□□□□ 0.97
LRRK1-208ENST00000532029 FKBP10Q96AY3 582 aa21.14■□□□□ 0.97
LRRK1-208ENST00000532029 F2RL3Q96RI0 385 aa21.14■□□□□ 0.97
LRRK1-208ENST00000532029 SHCBP1LQ9BZQ2 653 aa21.14■□□□□ 0.97
LRRK1-208ENST00000532029 SLC22A11Q9NSA0 550 aa21.14■□□□□ 0.97
LRRK1-208ENST00000532029 ZMIZ1Q9ULJ6 1067 aa21.14■□□□□ 0.97
LRRK1-208ENST00000532029 FARSAQ9Y285 508 aaKnown RBP21.14■□□□□ 0.97
LRRK1-208ENST00000532029 PADI2Q9Y2J8 665 aa21.14■□□□□ 0.97
LRRK1-208ENST00000532029 A0A087WV48 116 aa21.13■□□□□ 0.97
LRRK1-208ENST00000532029 MAGEB17A8MXT2 336 aa21.13■□□□□ 0.97
LRRK1-208ENST00000532029 FOXE1O00358 373 aaPredicted RBP21.13■□□□□ 0.97
LRRK1-208ENST00000532029 MANBAO00462 879 aa21.13■□□□□ 0.97
LRRK1-208ENST00000532029 GALR3O60755 368 aaPredicted RBP21.13■□□□□ 0.97
LRRK1-208ENST00000532029 TBX6O95947 436 aaPredicted RBP21.13■□□□□ 0.97
LRRK1-208ENST00000532029 ALBP02768 609 aa21.13■□□□□ 0.97
LRRK1-208ENST00000532029 SERPINE1P05121 402 aa21.13■□□□□ 0.97
LRRK1-208ENST00000532029 RAP1GDS1P52306 607 aa21.13■□□□□ 0.97
LRRK1-208ENST00000532029 PLA2G16P53816 162 aa21.13■□□□□ 0.97
LRRK1-208ENST00000532029 SNRPNP63162 240 aaKnown RBP21.13■□□□□ 0.97
LRRK1-208ENST00000532029 DEPDC1Q5TB30 811 aa21.13■□□□□ 0.97
LRRK1-208ENST00000532029 KHDRBS2Q5VWX1 349 aaKnown RBP21.13■□□□□ 0.97
LRRK1-208ENST00000532029 OVCH1Q7RTY7 1134 aa21.13■□□□□ 0.97
LRRK1-208ENST00000532029 CUZD1Q86UP6 607 aa21.13■□□□□ 0.97
LRRK1-208ENST00000532029 PDSS2Q86YH6 399 aa21.13■□□□□ 0.97
LRRK1-208ENST00000532029 ENDOVQ8N8Q3 282 aaKnown RBP21.13■□□□□ 0.97
LRRK1-208ENST00000532029 SERPINI1Q99574 410 aa21.13■□□□□ 0.97
LRRK1-208ENST00000532029 AICDAQ9GZX7 198 aa21.13■□□□□ 0.97
LRRK1-208ENST00000532029 OR51B5Q9H339 312 aa21.13■□□□□ 0.97
LRRK1-208ENST00000532029 COPS7BQ9H9Q2 264 aaPredicted RBP21.13■□□□□ 0.97
LRRK1-208ENST00000532029 PSD3Q9NYI0 1048 aa21.13■□□□□ 0.97
LRRK1-208ENST00000532029 TRPC4Q9UBN4 977 aa21.13■□□□□ 0.97
LRRK1-208ENST00000532029 ZNF860A6NHJ4 632 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 TERTO14746 1132 aaKnown RBP21.12■□□□□ 0.97
LRRK1-208ENST00000532029 ATP8B1O43520 1251 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 ULK1O75385 1050 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 RDH16O75452 317 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 SMIM10L1P0DMW3 83 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 F8A1P23610 371 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 PTPN4P29074 926 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 WDR4P57081 412 aaKnown RBP21.12■□□□□ 0.97
LRRK1-208ENST00000532029 BTN3A2P78410 334 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 OCA2Q04671 838 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 GALNT1Q10472 559 aaPredicted RBP21.12■□□□□ 0.97
LRRK1-208ENST00000532029 SRSF6Q13247 344 aaKnown RBP21.12■□□□□ 0.97
LRRK1-208ENST00000532029 ST3GAL2Q16842 350 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 ARL13AQ5H913 290 aaPredicted RBP21.12■□□□□ 0.97
LRRK1-208ENST00000532029 COX15Q7KZN9 410 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 SMIM10Q96HG1 83 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 KCNA7Q96RP8 456 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 ROGDIQ9GZN7 287 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 HCN3Q9P1Z3 774 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 ZNF282Q9UDV7 671 aaPredicted RBP21.12■□□□□ 0.97
LRRK1-208ENST00000532029 IL17BQ9UHF5 180 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 PPT2Q9UMR5 302 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 MAP4K5Q9Y4K4 846 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 TIMM22Q9Y584 194 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 PCDHGA6Q9Y5G7 932 aa21.12■□□□□ 0.97
LRRK1-208ENST00000532029 A0A0G2JN53 185 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 C4orf51C9J302 202 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 SAP18O00422 153 aaKnown RBP21.11■□□□□ 0.97
LRRK1-208ENST00000532029 B3GALT4O96024 378 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 PDYNP01213 254 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 CHRNGP07510 517 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 BGNP21810 368 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 GRK2P25098 689 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 UCNP55089 124 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 MAT1AQ00266 395 aaKnown RBP21.11■□□□□ 0.97
LRRK1-208ENST00000532029 TLE3Q04726 772 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 HSP90B2PQ58FF3 399 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 TCHHL1Q5QJ38 904 aaPredicted RBP21.11■□□□□ 0.97
LRRK1-208ENST00000532029 MRPL14Q6P1L8 145 aaKnown RBP21.11■□□□□ 0.97
LRRK1-208ENST00000532029 ABHD17CQ6PCB6 329 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 CCDC81Q6ZN84 652 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 AMER3Q8N944 861 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 OR6Y1Q8NGX8 325 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 RGMAQ96B86 450 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 KCNC2Q96PR1 638 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 TBCDQ9BTW9 1192 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 ACTL8Q9H568 366 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 CLK4Q9HAZ1 481 aaKnown RBP21.11■□□□□ 0.97
LRRK1-208ENST00000532029 MKKSQ9NPJ1 570 aaPredicted RBP21.11■□□□□ 0.97
LRRK1-208ENST00000532029 FARSBQ9NSD9 589 aaKnown RBP21.11■□□□□ 0.97
LRRK1-208ENST00000532029 CTSFQ9UBX1 484 aa21.11■□□□□ 0.97
LRRK1-208ENST00000532029 NXT1Q9UKK6 140 aaKnown RBP21.11■□□□□ 0.97
LRRK1-208ENST00000532029 IGF2RP11717 2491 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 AHCTF1Q8WYP5 2266 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 TMEM114B3SHH9 223 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 AZIN1O14977 448 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 HSPA4LO95757 839 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 UROSP10746 265 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 ITPKBP27987 946 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 FOLR3P41439 243 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 MTTPP55157 894 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 FOXA1P55317 472 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 PPP2R2AP63151 447 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms