RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 CDCP1Q9H5V8 836 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 SAR1BQ9Y6B6 198 aa15.78■□□□□ 0.12
CPSF1-207ENST00000531727 IGKV3D-11A0A0A0MRZ8 115 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 TCRBV16S1A1N1A0A5B0 115 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 ARHGAP10A1A4S6 786 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 SAGE2PA6NJ88 616 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 C4orf51C9J302 202 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 FAM227AF5H4B4 570 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 PSMD12O00232 456 aaPredicted RBP15.77■□□□□ 0.12
CPSF1-207ENST00000531727 SLC19A2O60779 497 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 NEURL1O76050 574 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 MLYCDO95822 493 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 SP1P08047 785 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 SERPINA6P08185 405 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 GNG11P61952 73 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 CBLBQ13191 982 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 TOR1AIP1Q5JTV8 583 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 FRA10AC1Q70Z53 315 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 CEP97Q8IW35 865 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 KLHDC8AQ8IYD2 350 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 CA13Q8N1Q1 262 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 FAM98AQ8NCA5 519 aaKnown RBP15.77■□□□□ 0.12
CPSF1-207ENST00000531727 THAP3Q8WTV1 239 aaPredicted RBP15.77■□□□□ 0.12
CPSF1-207ENST00000531727 VPS39Q96JC1 886 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 GPR137Q96N19 417 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 FRMD6Q96NE9 622 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 MCMBPQ9BTE3 642 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 AICDAQ9GZX7 198 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 RHOJQ9H4E5 214 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 POPDC3Q9HBV1 291 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 PRDM9Q9NQV7 894 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 NSMCE4AQ9NXX6 385 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 LRFN1Q9P244 771 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 CTNNAL1Q9UBT7 734 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 SH3BGRL2Q9UJC5 107 aa15.77■□□□□ 0.12
CPSF1-207ENST00000531727 KLF2Q9Y5W3 355 aaPredicted RBP15.77■□□□□ 0.12
CPSF1-207ENST00000531727 NOTCH2Q04721 2471 aa15.77■□□□□ 0.11
CPSF1-207ENST00000531727 EFCAB8A8MWE9 144 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 WDR47O94967 919 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 C1GALT1C1LP0DN25 315 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 GNAZP19086 355 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 MAOAP21397 527 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 TPP2P29144 1249 aaPredicted RBP15.76■□□□□ 0.11
CPSF1-207ENST00000531727 PAFAH1B1P43034 410 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 RPL21P46778 160 aaKnown RBP15.76■□□□□ 0.11
CPSF1-207ENST00000531727 SLC6A12P48065 614 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 CASP6P55212 293 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 STXBP1P61764 594 aaKnown RBP15.76■□□□□ 0.11
CPSF1-207ENST00000531727 ALDH6A1Q02252 535 aaKnown RBP15.76■□□□□ 0.11
CPSF1-207ENST00000531727 ILF2Q12905 390 aaKnown RBP15.76■□□□□ 0.11
CPSF1-207ENST00000531727 TSNQ15631 228 aaKnown RBP15.76■□□□□ 0.11
CPSF1-207ENST00000531727 KRTCAP3Q53RY4 240 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 SLC25A25Q6KCM7 469 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 RPTNQ6XPR3 784 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 GALNTL5Q7Z4T8 443 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 MRGPRGQ86SM5 289 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 ZNF808Q8N4W9 903 aaPredicted RBP15.76■□□□□ 0.11
CPSF1-207ENST00000531727 NFAM1Q8NET5 270 aaPredicted RBP15.76■□□□□ 0.11
CPSF1-207ENST00000531727 RHBDF1Q96CC6 855 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 NAPGQ99747 312 aaPredicted RBP15.76■□□□□ 0.11
CPSF1-207ENST00000531727 RHBGQ9H310 441 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 GPAMQ9HCL2 828 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 NECTIN3Q9NQS3 549 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 ZNF835Q9Y2P0 537 aa15.76■□□□□ 0.11
CPSF1-207ENST00000531727 ENO4A6NNW6 628 aa15.75■□□□□ 0.11
CPSF1-207ENST00000531727 H2AFYO75367 372 aaKnown RBP15.75■□□□□ 0.11
CPSF1-207ENST00000531727 GDF5P43026 501 aa15.75■□□□□ 0.11
CPSF1-207ENST00000531727 SLC12A2P55011 1212 aa15.75■□□□□ 0.11
CPSF1-207ENST00000531727 MLF1P58340 268 aa15.75■□□□□ 0.11
CPSF1-207ENST00000531727 C18orf21Q32NC0 220 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-207ENST00000531727 ZNF468Q5VIY5 522 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-207ENST00000531727 BNC2Q6ZN30 1099 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-207ENST00000531727 SLCO4C1Q6ZQN7 724 aa15.75■□□□□ 0.11
CPSF1-207ENST00000531727 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-207ENST00000531727 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.75■□□□□ 0.11
CPSF1-207ENST00000531727 ZBED8Q8IZ13 594 aa15.75■□□□□ 0.11
CPSF1-207ENST00000531727 ARMC2Q8NEN0 867 aa15.75■□□□□ 0.11
CPSF1-207ENST00000531727 TTLQ8NG68 377 aa15.75■□□□□ 0.11
CPSF1-207ENST00000531727 GAL3ST3Q96A11 431 aa15.75■□□□□ 0.11
CPSF1-207ENST00000531727 MAGED4Q96JG8 741 aa15.75■□□□□ 0.11
CPSF1-207ENST00000531727 UNKQ9C0B0 810 aaKnown RBP15.75■□□□□ 0.11
CPSF1-207ENST00000531727 DERL2Q9GZP9 239 aa15.75■□□□□ 0.11
CPSF1-207ENST00000531727 TSPAN10Q9H1Z9 355 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-207ENST00000531727 RNF14Q9UBS8 474 aa15.75■□□□□ 0.11
CPSF1-207ENST00000531727 SNX24Q9Y343 169 aa15.75■□□□□ 0.11
CPSF1-207ENST00000531727 MMACHCQ9Y4U1 282 aa15.75■□□□□ 0.11
CPSF1-207ENST00000531727 NPIPA5E9PKD4 350 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 NME2P1O60361 137 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 SLC25A12O75746 678 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 WISP3O95389 354 aaPredicted RBP15.74■□□□□ 0.11
CPSF1-207ENST00000531727 PRF1P14222 555 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 NME2P22392 152 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 GSTM2P28161 218 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 GRNP28799 593 aaKnown RBP15.74■□□□□ 0.11
CPSF1-207ENST00000531727 TNFRSF8P28908 595 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 BTN3A2P78410 334 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 POU4F1Q01851 419 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 SLBPQ14493 270 aaKnown RBP eCLIP15.74■□□□□ 0.11
CPSF1-207ENST00000531727 TGFBIQ15582 683 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 C3AR1Q16581 482 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms