RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	UCK2	Q9BZX2	261 aa		10.64	□□□□□ -0.71
PTP4A2-211	ENST00000528840	TRIM45	Q9H8W5	580 aa	Predicted RBP	10.64	□□□□□ -0.71
PTP4A2-211	ENST00000528840	NECTIN3	Q9NQS3	549 aa		10.64	□□□□□ -0.71
PTP4A2-211	ENST00000528840	ARL15	Q9NXU5	204 aa		10.64	□□□□□ -0.71
PTP4A2-211	ENST00000528840	TAS2R13	Q9NYV9	303 aa		10.64	□□□□□ -0.71
PTP4A2-211	ENST00000528840	ZFAT	Q9P243	1243 aa		10.64	□□□□□ -0.71
PTP4A2-211	ENST00000528840	CSMD2	Q7Z408	3487 aa		10.64	□□□□□ -0.71
PTP4A2-211	ENST00000528840	USP27X	A6NNY8	438 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	PSMD12	O00232	456 aa	Predicted RBP	10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	FCHO1	O14526	889 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	PEX1	O43933	1283 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	GUCA1C	O95843	209 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	AHSG	P02765	367 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	GABRB3	P28472	473 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	TRHR	P34981	398 aa	Predicted RBP	10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	PGGT1B	P53609	377 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	CDKN2D	P55273	166 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	SKP1	P63208	163 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	DHX9	Q08211	1270 aa	Known RBP	10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	RBBP5	Q15291	538 aa	Known RBP	10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	TMEM211	Q6ICI0	200 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	SPNS3	Q6ZMD2	512 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	ABHD13	Q7L211	337 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	CD163	Q86VB7	1156 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	TMEM156	Q8N614	296 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	C2CD4A	Q8NCU7	369 aa	Predicted RBP	10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	OR56A3	Q8NH54	315 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	LILRB4	Q8NHJ6	448 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	NT5C	Q8TCD5	201 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	MS4A14	Q96JA4	679 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	FAM167B	Q9BTA0	163 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	TRIM54	Q9BYV2	358 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	DEFB127	Q9H1M4	99 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	KLHL31	Q9H511	634 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	PRDM9	Q9NQV7	894 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	PLSCR2	Q9NRY7	297 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	ZFP69B	Q9UJL9	534 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	FBXW2	Q9UKT8	454 aa		10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	KLF13	Q9Y2Y9	288 aa	Predicted RBP	10.63	□□□□□ -0.71
PTP4A2-211	ENST00000528840	TRBV11-1	A0A0K0K1C0	115 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	CTAGE15	A4D2H0	777 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	NKX2-6	A6NCS4	301 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	PABPN1L	A6NDY0	278 aa	Known RBP	10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	SAGE2P	A6NJ88	616 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	FANCG	O15287	622 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	TFEB	P19484	476 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	CDC25B	P30305	580 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	SCTR	P47872	440 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	IL2	P60568	153 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	GPR85	P60893	370 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	PMPCA	Q10713	525 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	SP140	Q13342	867 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	RBM20	Q5T481	1227 aa	Known RBP	10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	NIPAL1	Q6NVV3	410 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	QSOX2	Q6ZRP7	698 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	MDGA2	Q7Z553	956 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	CTAGE6	Q86UF2	777 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	MARVELD2	Q8N4S9	558 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	ACBD4	Q8NC06	268 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	ARMC2	Q8NEN0	867 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	OR52N2	Q8NGI0	321 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	C16orf52	Q8NHV5	167 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	SLC5A11	Q8WWX8	675 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	NEIL2	Q969S2	332 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	TSNARE1	Q96NA8	513 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	SARG	Q9BW04	601 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	SPNS1	Q9H2V7	528 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	KCNJ16	Q9NPI9	418 aa		10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	PNO1	Q9NRX1	252 aa	Known RBP	10.62	□□□□□ -0.71
PTP4A2-211	ENST00000528840	TCRBV16S1A1N1	A0A5B0	115 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	URAD	A6NGE7	173 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	FAM90A27P	A6NNH2	459 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	GOLGA6L6	A8MZA4	724 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	DIAPH2	O60879	1101 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	ITGA10	O75578	1167 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	MYO1D	O94832	1006 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	SMIM10L1	P0DMW3	83 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	RNH1	P13489	461 aa	Known RBP	10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	AHR	P35869	848 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	MAGEA3	P43357	314 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	CLCN2	P51788	898 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	NR0B1	P51843	470 aa	Known RBP	10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	BTN3A2	P78410	334 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	CMPK2	Q5EBM0	449 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	TOR1AIP1	Q5JTV8	583 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	CCDC137	Q6PK04	289 aa	Known RBP	10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	C16orf47	Q6ZP98	133 aa	Predicted RBP	10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	STRA8	Q7Z7C7	330 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	CCDC71	Q8IV32	467 aa	Predicted RBP	10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	CYP4Z2P	Q8N1L4	340 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	NAT8L	Q8N9F0	302 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	B3GNT7	Q8NFL0	401 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	TRIM58	Q8NG06	486 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	ASB5	Q8WWX0	329 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	RND1	Q92730	232 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	SMIM10	Q96HG1	83 aa		10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	TREX2	Q9BQ50	279 aa	Predicted RBP	10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	LIN28A	Q9H9Z2	209 aa	Known RBP	10.61	□□□□□ -0.71
PTP4A2-211	ENST00000528840	CLK4	Q9HAZ1	481 aa	Known RBP	10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms