RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 ATG9BQ674R7 924 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 TMIGD1Q6UXZ0 262 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 HACD2Q6Y1H2 254 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 RNF165Q6ZSG1 346 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 SLC51BQ86UW2 128 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 STK32CQ86UX6 486 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 ANKRD46Q86W74 232 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 PLD3Q8IV08 490 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 KLHDC8AQ8IYD2 350 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 ENDOVQ8N8Q3 282 aaKnown RBP7.4□□□□□ -1.23
SOX6-211ENST00000528429 LINC01555Q8NAE3 123 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 OR52E1Q8NGJ3 308 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 TSPEARQ8WU66 669 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 SLC13A3Q8WWT9 602 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 ASB12Q8WXK4 309 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 SMPDL3AQ92484 453 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 SLC47A1Q96FL8 570 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 CNDP2Q96KP4 475 aaKnown RBP7.4□□□□□ -1.23
SOX6-211ENST00000528429 PRAP1Q96NZ9 151 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 OR52E6Q96RD3 313 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 HAUS8Q9BT25 410 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 FAM192AQ9GZU8 254 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 LTB4R2Q9NPC1 389 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 EGFL7Q9UHF1 273 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 PCDHGA3Q9Y5H0 932 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 SLCO1B1Q9Y6L6 691 aa7.4□□□□□ -1.23
SOX6-211ENST00000528429 FEZF1A0PJY2 475 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 MYO1DO94832 1006 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 B3GALT4O96024 378 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 SERPIND1P05546 499 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 PGRP06401 933 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 PRPS2P11908 318 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 EFNA1P20827 205 aaPredicted RBP7.39□□□□□ -1.23
SOX6-211ENST00000528429 CD6P30203 668 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 MRPL19P49406 292 aaKnown RBP7.39□□□□□ -1.23
SOX6-211ENST00000528429 DAB2P98082 770 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 PRKCQQ04759 706 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 RPE65Q16518 533 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 SGCAQ16586 387 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 ALG11Q2TAA5 492 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 SMU1Q2TAY7 513 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 NDUFAF5Q5TEU4 345 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 KIAA0895LQ68EN5 471 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 ANKRD26P1Q6NSI1 321 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 CLEC2AQ6UVW9 174 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 ANGPTL8Q6UXH0 198 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 IKBIPQ70UQ0 350 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 KIAA2013Q8IYS2 634 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 OR7G1Q8NGA0 311 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 DNAJC9Q8WXX5 260 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 JADE3Q92613 823 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 REPS1Q96D71 796 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 HOPXQ9BPY8 73 aaPredicted RBP7.39□□□□□ -1.23
SOX6-211ENST00000528429 SPATA6Q9NWH7 488 aaPredicted RBP7.39□□□□□ -1.23
SOX6-211ENST00000528429 UCKL1Q9NWZ5 548 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 CMTM6Q9NX76 183 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 WSB2Q9NYS7 404 aaPredicted RBP7.39□□□□□ -1.23
SOX6-211ENST00000528429 TMEM181Q9P2C4 612 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 STX18Q9P2W9 335 aaKnown RBP7.39□□□□□ -1.23
SOX6-211ENST00000528429 CRNNQ9UBG3 495 aaPredicted RBP7.39□□□□□ -1.23
SOX6-211ENST00000528429 STOML1Q9UBI4 398 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.39□□□□□ -1.23
SOX6-211ENST00000528429 PCDHGB7Q9Y5F8 929 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 SNX8Q9Y5X2 465 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 ANKRD34BA5PLL1 514 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 ZNF839A8K0R7 811 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 PRAMEF26H0Y7S4 382 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 STATHP02808 62 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 ANXA4P09525 319 aaPredicted RBP7.39□□□□□ -1.23
SOX6-211ENST00000528429 ANPEPP15144 967 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 S100A3P33764 101 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 PCP4P48539 62 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 RAB28P51157 221 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 MTPNP58546 118 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 SLC34A1Q06495 639 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 TRIM25Q14258 630 aaKnown RBP7.39□□□□□ -1.23
SOX6-211ENST00000528429 ARHGAP19Q14CB8 494 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 LRRC36Q1X8D7 754 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 AARDQ4LEZ3 155 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 CLVS2Q5SYC1 327 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 FOXB2Q5VYV0 432 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 NANOGP8Q6NSW7 305 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 PRMT9Q6P2P2 845 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 LCTLQ6UWM7 567 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.39□□□□□ -1.23
SOX6-211ENST00000528429 KRT78Q8N1N4 520 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 MINDY1Q8N5J2 469 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 TMEM145Q8NBT3 493 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 SETD7Q8WTS6 366 aaKnown RBP7.39□□□□□ -1.23
SOX6-211ENST00000528429 CXorf40BQ96DE9 158 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 THAP11Q96EK4 314 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 GBP5Q96PP8 586 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 MENTQ9BUN1 341 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 TCEAL2Q9H3H9 227 aaPredicted RBP7.39□□□□□ -1.23
SOX6-211ENST00000528429 CLMPQ9H6B4 373 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 NANOGQ9H9S0 305 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 C12orf10Q9HB07 376 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 S100A14Q9HCY8 104 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 DMRT3Q9NQL9 472 aa7.39□□□□□ -1.23
SOX6-211ENST00000528429 ANGPTL2Q9UKU9 493 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms