RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 GPAT3Q53EU6 434 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 C2CD6Q53TS8 623 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 PAN3Q58A45 887 aaKnown RBP3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 PDZK1Q5T2W1 519 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 DDI2Q5TDH0 399 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 LIN9Q5TKA1 542 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 BROXQ5VW32 411 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 LIPNQ5VXI9 398 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 KRT39Q6A163 491 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 RAB12Q6IQ22 244 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC25A25Q6KCM7 469 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 XRRA1Q6P2D8 792 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 PNCKQ6P2M8 343 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 SCYL2Q6P3W7 929 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 CNNM4Q6P4Q7 775 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 NOTUMQ6P988 496 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 DEGS2Q6QHC5 323 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 NAPRTQ6XQN6 538 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 BRINP3Q76B58 766 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC26A9Q7LBE3 791 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 C16orf62Q7Z3J2 963 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 CAMKMTQ7Z624 323 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 DPPA2Q7Z7J5 298 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 LRRTM4Q86VH4 590 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 ANKRD46Q86W74 232 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 CHSY1Q86X52 802 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 DENND6AQ8IWF6 608 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 ENTHD1Q8IYW4 607 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 NRSN1Q8IZ57 195 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 FBXW8Q8N3Y1 598 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC25A41Q8N5S1 370 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 EIF4E3Q8N5X7 224 aaKnown RBP3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 METTL13Q8N6R0 699 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 EMC1Q8N766 993 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 LRRC57Q8N9N7 239 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 IL17REQ8NFR9 667 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 OR13C3Q8NGS6 347 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 OR6X1Q8NH79 312 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 AKR7LQ8NHP1 331 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 CHD5Q8TDI0 1954 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 ZFP90Q8TF47 636 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 NSMAFQ92636 917 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 PROX1Q92786 737 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 HOXB13Q92826 284 aaPredicted RBP3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 RPL3LQ92901 407 aaKnown RBP3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 USP7Q93009 1102 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 AP2M1Q96CW1 435 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 MTFMTQ96DP5 389 aaKnown RBP3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 CLPTM1LQ96KA5 538 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 CNOT6LQ96LI5 555 aaKnown RBP3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 GLT1D1Q96MS3 346 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 RNF145Q96MT1 663 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 RILPQ96NA2 401 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 DACH2Q96NX9 599 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 FAM111AQ96PZ2 611 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 UHRF1Q96T88 793 aaPredicted RBP3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 ZBTB18Q99592 522 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 MYOCQ99972 504 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 APOL4Q9BPW4 351 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 EIF2AK1Q9BQI3 630 aaKnown RBP3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 PYM1Q9BRP8 204 aaKnown RBP3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 TTYH2Q9BSA4 534 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 TRIM51Q9BSJ1 452 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC26A6Q9BXS9 759 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 OPN3Q9H1Y3 402 aaPredicted RBP3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 SEMA6AQ9H2E6 1030 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 FOXP1Q9H334 677 aaPredicted RBP3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 RIMS4Q9H426 269 aaPredicted RBP3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 OPA3Q9H6K4 179 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 GLOD4Q9HC38 313 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 CHMP1AQ9HD42 196 aaPredicted RBP3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 ZDHHC4Q9NPG8 344 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 TOPORSQ9NS56 1045 aaPredicted RBP3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 LANCL2Q9NS86 450 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 AGPAT5Q9NUQ2 364 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 MCUBQ9NWR8 336 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 IMPAD1Q9NX62 359 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 TMOD3Q9NYL9 352 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 GRHPRQ9UBQ7 328 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 MIOXQ9UGB7 285 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 RGS17Q9UGC6 210 aaPredicted RBP3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 MAD2L2Q9UI95 211 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 VPS28Q9UK41 221 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 MKLN1Q9UL63 735 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 PRPF19Q9UMS4 504 aaKnown RBP3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 SCML1Q9UN30 329 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 MGAT4BQ9UQ53 548 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 BAIAP2Q9UQB8 552 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 RUVBL2Q9Y230 463 aaKnown RBP3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC22A14Q9Y267 594 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 TNFSF13BQ9Y275 285 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 KLHL20Q9Y2M5 609 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 PCDHA1Q9Y5I3 950 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 RNF215Q9Y6U7 377 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 A3GALT2U3KPV4 340 aa3.57□□□□□ -1.84
CLNS1A-209ENST00000527299 AKAP11Q9UKA4 1901 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 TULP4Q9NRJ4 1543 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 NID2Q14112 1375 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 PRAMEF33A0A0G2JMD5 474 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 A0A0G2JND7 137 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms