RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 TAC3Q9UHF0 121 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 RNF112Q9ULX5 631 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 SLC22A14Q9Y267 594 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 BTRCQ9Y297 605 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 PLLPQ9Y342 182 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 ATRQ13535 2644 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 A0A0J9YY10 115 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 OR2A25A4D2G3 310 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 MATN2O00339 956 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 PPP6CO00743 305 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 LCMT2O60294 686 aaKnown RBP10.36□□□□□ -0.75
NEDD8-204ENST00000526430 SPAG7O75391 227 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 SIX3O95343 332 aaPredicted RBP10.36□□□□□ -0.75
NEDD8-204ENST00000526430 ZBTB11O95625 1053 aaPredicted RBP10.36□□□□□ -0.75
NEDD8-204ENST00000526430 MSL3P1P0C860 447 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 MAGP20916 626 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 ETV4P43268 484 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 HSPA7P48741 367 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 SMSP52788 366 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 SNRPNP63162 240 aaKnown RBP10.36□□□□□ -0.75
NEDD8-204ENST00000526430 ADORA2A-AS1P86434 159 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 PCDH1Q08174 1060 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 Q0VFX4 171 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 SETDB1Q15047 1291 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 PCBP2Q15366 365 aaKnown RBP eCLIP10.36□□□□□ -0.759e-10■□□□□ 8.1
NEDD8-204ENST00000526430 SF1Q15637 639 aaKnown RBP10.36□□□□□ -0.75
NEDD8-204ENST00000526430 FIGLAQ6QHK4 219 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 LCTLQ6UWM7 567 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 THOC6Q86W42 341 aaKnown RBP10.36□□□□□ -0.75
NEDD8-204ENST00000526430 CNPY4Q8N129 248 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 ABHD11Q8NFV4 315 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 OR4K1Q8NGD4 311 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 GBP5Q96PP8 586 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 MIPEPQ99797 713 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 C17orf62Q9BQA9 187 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 TRIM54Q9BYV2 358 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 CD244Q9BZW8 370 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 CHRNA10Q9GZZ6 450 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 SPNS1Q9H2V7 528 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 MRPL46Q9H2W6 279 aaKnown RBP10.36□□□□□ -0.75
NEDD8-204ENST00000526430 GSX1Q9H4S2 264 aaPredicted RBP10.36□□□□□ -0.75
NEDD8-204ENST00000526430 VIPAS39Q9H9C1 493 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 ACTR5Q9H9F9 607 aaPredicted RBP10.36□□□□□ -0.75
NEDD8-204ENST00000526430 ZBTB26Q9HCK0 441 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 ENAMQ9NRM1 1142 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 NUDT4Q9NZJ9 180 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 CD274Q9NZQ7 290 aa10.36□□□□□ -0.75
NEDD8-204ENST00000526430 RPH3AQ9Y2J0 694 aaPredicted RBP10.36□□□□□ -0.75
NEDD8-204ENST00000526430 A8MT66 165 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 RGS16O15492 202 aaPredicted RBP10.35□□□□□ -0.75
NEDD8-204ENST00000526430 KDM1AO60341 852 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 GLRA3O75311 464 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 CD63P08962 238 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 CD22P20273 847 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 CDH3P22223 829 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 RPA3P35244 121 aaPredicted RBP10.35□□□□□ -0.75
NEDD8-204ENST00000526430 GCGRP47871 477 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 HNMTP50135 292 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 ALDH18A1P54886 795 aaKnown RBP10.35□□□□□ -0.75
NEDD8-204ENST00000526430 CSNK1G2P78368 415 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 LTBQ06643 244 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 PRKAA1Q13131 559 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 PFKFB4Q16877 469 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 UNC50Q53HI1 259 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 TTMPQ5BVD1 217 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 CATSPEREQ5SY80 951 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 AGAP7PQ5VUJ5 663 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 CES4AQ5XG92 561 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 ZNF385CQ66K41 422 aaPredicted RBP10.35□□□□□ -0.75
NEDD8-204ENST00000526430 CAPN13Q6MZZ7 669 aaPredicted RBP10.35□□□□□ -0.75
NEDD8-204ENST00000526430 GFRALQ6UXV0 394 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 SLCO4C1Q6ZQN7 724 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 RPS27LQ71UM5 84 aaKnown RBP10.35□□□□□ -0.75
NEDD8-204ENST00000526430 HDXQ7Z353 690 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 PAQR7Q86WK9 346 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 OR6Y1Q8NGX8 325 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 TCP10LQ8TDR4 215 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 EXT2Q93063 718 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 NEIL2Q969S2 332 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 ZUFSPQ96AP4 578 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 NACC2Q96BF6 587 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 SLC22A18Q96BI1 424 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 APOPT1Q96IL0 206 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 ZNF285Q96NJ3 590 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 AGAP4Q96P64 663 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 EGFL8Q99944 293 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 PLCD4Q9BRC7 762 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 DPH7Q9BTV6 452 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 C1QTNF3Q9BXJ4 246 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 EPS8L2Q9H6S3 715 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 FANCEQ9HB96 536 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 SSU72Q9NP77 194 aaKnown RBP10.35□□□□□ -0.75
NEDD8-204ENST00000526430 CCDC177Q9NQR7 707 aaPredicted RBP10.35□□□□□ -0.75
NEDD8-204ENST00000526430 TNFRSF10DQ9UBN6 386 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 ZNF225Q9UK10 706 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 GRID1Q9ULK0 1009 aa10.35□□□□□ -0.75
NEDD8-204ENST00000526430 LOC105369274A0A096LPK9 316 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 LOC102723532A0A0G2JNH3 316 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 SUPT3HB4E1H0 165 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 STX16-NPEPL1H3BU86 382 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms