RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 PSMG3-AS1Q96PY0 264 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 LPAR4Q99677 370 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 BARD1Q99728 777 aaKnown RBP17.47■□□□□ 0.39
CAPN1-203ENST00000525013 LRRC1Q9BTT6 524 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 CAPS2Q9BXY5 557 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 KCNK13Q9HB14 408 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 TRAV17A0A0B4J275 112 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 MAGEB17A8MXT2 336 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 PSMD12O00232 456 aaPredicted RBP17.46■□□□□ 0.39
CAPN1-203ENST00000525013 CLGNO14967 610 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 STK16O75716 305 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 RNH1P13489 461 aaKnown RBP17.46■□□□□ 0.39
CAPN1-203ENST00000525013 STXBP1P61764 594 aaKnown RBP17.46■□□□□ 0.39
CAPN1-203ENST00000525013 HYAL2Q12891 473 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 EFTUD2Q15029 972 aaKnown RBP eCLIP17.46■□□□□ 0.39
CAPN1-203ENST00000525013 EXT1Q16394 746 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 CDKL4Q5MAI5 379 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 FCRLBQ6BAA4 426 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 PAPD4Q6PIY7 484 aaKnown RBP17.46■□□□□ 0.39
CAPN1-203ENST00000525013 CMC1Q7Z7K0 106 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 CYP4X1Q8N118 509 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 TTLQ8NG68 377 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 CREB3L4Q8TEY5 395 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 SSC4DQ8WTU2 575 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 FAR1Q8WVX9 515 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 ZNF592Q92610 1267 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 KIAA1191Q96A73 305 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 FAR2Q96K12 515 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 UBXN10Q96LJ8 280 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 PTCHD1Q96NR3 888 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 TMEM79Q9BSE2 394 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 ALG9Q9H6U8 611 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 PRM3Q9NNZ6 103 aa17.46■□□□□ 0.39
CAPN1-203ENST00000525013 CYSRT1A8MQ03 144 aa17.45■□□□□ 0.38
CAPN1-203ENST00000525013 PRMT3O60678 531 aa17.45■□□□□ 0.38
CAPN1-203ENST00000525013 GP1BBP13224 206 aa17.45■□□□□ 0.38
CAPN1-203ENST00000525013 GGT5P36269 586 aa17.45■□□□□ 0.38
CAPN1-203ENST00000525013 BTN3A2P78410 334 aa17.45■□□□□ 0.38
CAPN1-203ENST00000525013 GUCY2DQ02846 1103 aa17.45■□□□□ 0.38
CAPN1-203ENST00000525013 NAB1Q13506 487 aa17.45■□□□□ 0.38
CAPN1-203ENST00000525013 PDK4Q16654 411 aa17.45■□□□□ 0.38
CAPN1-203ENST00000525013 TBC1D1Q86TI0 1168 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-203ENST00000525013 ST6GALNAC3Q8NDV1 305 aa17.45■□□□□ 0.38
CAPN1-203ENST00000525013 SUN3Q8TAQ9 357 aa17.45■□□□□ 0.38
CAPN1-203ENST00000525013 CLK4Q9HAZ1 481 aaKnown RBP17.45■□□□□ 0.38
CAPN1-203ENST00000525013 GPRC5BQ9NZH0 403 aa17.45■□□□□ 0.38
CAPN1-203ENST00000525013 A0A0G2JN53 185 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 ANKDD1BA6NHY2 528 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 FAM227AF5H4B4 570 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 CCNT2O60583 730 aaKnown RBP17.44■□□□□ 0.38
CAPN1-203ENST00000525013 SLC35E2BP0CK96 405 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 SMIM10L1P0DMW3 83 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 MYBL2P10244 700 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 TFEBP19484 476 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 CRABP2P29373 138 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 BTG2P78543 158 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 UAP1Q16222 522 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-203ENST00000525013 WHAMMP3Q1A5X7 153 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 XKR6Q5GH73 641 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 ACER2Q5QJU3 275 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 RPUSD3Q6P087 351 aaKnown RBP17.44■□□□□ 0.38
CAPN1-203ENST00000525013 BCORP1Q8N888 145 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 PDPRQ8NCN5 879 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 STAG3L4Q8TBR4 150 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 M1APQ8TC57 530 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 GAL3ST3Q96A11 431 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 SMIM10Q96HG1 83 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 ZNF354BQ96LW1 612 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 AICDAQ9GZX7 198 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 RNF32Q9H0A6 362 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 NMRAL1Q9HBL8 299 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 MMP25Q9NPA2 562 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 OLAHQ9NV23 265 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 PTBP2Q9UKA9 531 aaKnown RBP17.44■□□□□ 0.38
CAPN1-203ENST00000525013 DOPEY1Q5JWR5 2465 aa17.44■□□□□ 0.38
CAPN1-203ENST00000525013 LRIT2A6NDA9 550 aa17.43■□□□□ 0.38
CAPN1-203ENST00000525013 OR5H15A6NDH6 313 aa17.43■□□□□ 0.38
CAPN1-203ENST00000525013 SUPT3HB4E1H0 165 aa17.43■□□□□ 0.38
CAPN1-203ENST00000525013 C4orf51C9J302 202 aa17.43■□□□□ 0.38
CAPN1-203ENST00000525013 ERI3O43414 337 aaKnown RBP17.43■□□□□ 0.38
CAPN1-203ENST00000525013 SUPT3HO75486 399 aa17.43■□□□□ 0.38
CAPN1-203ENST00000525013 MAOAP21397 527 aa17.43■□□□□ 0.38
CAPN1-203ENST00000525013 HNRNPH1P31943 449 aaKnown RBP17.43■□□□□ 0.38
CAPN1-203ENST00000525013 KCNC1P48547 511 aa17.43■□□□□ 0.38
CAPN1-203ENST00000525013 DOC2AQ14183 400 aa17.43■□□□□ 0.38
CAPN1-203ENST00000525013 MROH9Q5TGP6 573 aa17.43■□□□□ 0.38
CAPN1-203ENST00000525013 PITHD1Q9GZP4 211 aaPredicted RBP17.43■□□□□ 0.38
CAPN1-203ENST00000525013 EHD1Q9H4M9 534 aa17.43■□□□□ 0.38
CAPN1-203ENST00000525013 NT5DC2Q9H857 520 aa17.43■□□□□ 0.38
CAPN1-203ENST00000525013 ZDHHC18Q9NUE0 388 aa17.43■□□□□ 0.38
CAPN1-203ENST00000525013 ACOT9Q9Y305 439 aa17.43■□□□□ 0.38
CAPN1-203ENST00000525013 MYO7BQ6PIF6 2116 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 CLEC3AO75596 197 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 LTA4HP09960 611 aaKnown RBP17.42■□□□□ 0.38
CAPN1-203ENST00000525013 RNF224P0DH78 156 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 EDN3P14138 238 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 GSTM2P28161 218 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 ST13P50502 369 aaKnown RBP17.42■□□□□ 0.38
CAPN1-203ENST00000525013 PLA2G16P53816 162 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 SLC26A5P58743 744 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms