RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 FRMD1Q8N878 549 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 PTGR2Q8N8N7 351 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 PRELID2Q8N945 189 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 SCAIQ8N9R8 606 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 DCAF4L2Q8NA75 395 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 LILRB1Q8NHL6 650 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 RPLP0P6Q8NHW5 317 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 ACTL9Q8TC94 416 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 C1orf54Q8WWF1 131 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 KCNJ9Q92806 393 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 CLDN23Q96B33 292 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 TMEM18Q96B42 140 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 ARRDC3Q96B67 414 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 HDAC11Q96DB2 347 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 RBM41Q96IZ5 413 aaKnown RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 CAPZA3Q96KX2 299 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 ALS2CR12Q96Q35 445 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 SMIM14Q96QK8 99 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 PKP4Q99569 1192 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 GABRG3Q99928 467 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 NCAPGQ9BPX3 1015 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 DDX50Q9BQ39 737 aaKnown RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 SLC2A11Q9BYW1 496 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 TM6SF2Q9BZW4 377 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 SPRY4Q9C004 299 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 CARD9Q9H257 536 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 C8orf33Q9H7E9 229 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 LMAN1LQ9HAT1 526 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 ARFGAP3Q9NP61 516 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 ELOVL2Q9NXB9 296 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 NDUFAF4Q9P032 175 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 RCOR3Q9P2K3 495 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 DEC1Q9P2X7 70 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 THAP10Q9P2Z0 257 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 UPB1Q9UBR1 384 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 LHX3Q9UBR4 397 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 LCMT1Q9UIC8 334 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 VPS28Q9UK41 221 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 SARDHQ9UL12 918 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 DNPEPQ9ULA0 475 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 SNX12Q9UMY4 172 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 ERVW-1Q9UQF0 538 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 JRKLQ9Y4A0 524 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 HEY1Q9Y5J3 304 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 CACNA1HO95180 2353 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 SNRNP200O75643 2136 aaKnown RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 LOC400499M0QZD8 3231 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 SPENQ96T58 3664 aaKnown RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 COL27A1Q8IZC6 1860 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 ZFHX3Q15911 3703 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 BSNQ9UPA5 3926 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 IGLV5-37A0A075B6J1 123 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 A0A0U1RQS6 177 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 TYW5A2RUC4 315 aaKnown RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 GOLGA6L9A6NEM1 432 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 ARHGAP42A6NI28 874 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 C10orf142B7Z368 130 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 F5H423 210 aaPredicted RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 KCNK1O00180 336 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 TRAFD1O14545 582 aaPredicted RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 KIF5CO60282 957 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF500O60304 480 aaPredicted RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 CEP104O60308 925 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 ACTL6BO94805 426 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 PIGNO95427 931 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 FGGP02679 453 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 APODP05090 189 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 SP1P08047 785 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 SRPRAP08240 638 aaKnown RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 ZSCAN5DPP0CG00 497 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 CYP4B1P13584 511 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 PRLRP16471 622 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 DESP17661 470 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 GABRG2P18507 467 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 POLR2EP19388 210 aaKnown RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 CCNCP24863 283 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 PTPN3P26045 913 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 SERPINA4P29622 427 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 SERPINB6P35237 376 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 DRD3P35462 400 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 RPS9P46781 194 aaKnown RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 SERPINH1P50454 418 aaKnown RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 CCNHP51946 323 aaPredicted RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 YBEYP58557 167 aaPredicted RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 AP2B1P63010 937 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 MRPS25P82663 173 aaKnown RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 ADORA2A-AS1P86434 159 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 IL10RBQ08334 325 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 C2orf54Q08AI8 447 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 NIPAL4Q0D2K0 466 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 AP1B1Q10567 949 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 WASHC5Q12768 1159 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 SNX1Q13596 522 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 SLC12A1Q13621 1099 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 SPTAN1Q13813 2472 aaKnown RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 DMC1Q14565 340 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 RPS6KA2Q15349 733 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 DLG2Q15700 870 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 HNRNPA1L2Q32P51 320 aaKnown RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 POM121L1PQ3SYA9 428 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms