RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 SEC16BQ96JE7 1060 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 MAGEB10Q96LZ2 347 aaPredicted RBP15.27■□□□□ 0.04
CLN8-206ENST00000523237 C16orf45Q96MC5 204 aaPredicted RBP15.27■□□□□ 0.04
CLN8-206ENST00000523237 PITHD1Q9GZP4 211 aaPredicted RBP15.27■□□□□ 0.04
CLN8-206ENST00000523237 KLHL31Q9H511 634 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 KCNK13Q9HB14 408 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 CD274Q9NZQ7 290 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 RNF112Q9ULX5 631 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 HIVEP3Q5T1R4 2406 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 USP9YO00507 2555 aaPredicted RBP15.26■□□□□ 0.03
CLN8-206ENST00000523237 ESYT3A0FGR9 886 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 OR5H15A6NDH6 313 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 PSMD12O00232 456 aaPredicted RBP15.26■□□□□ 0.03
CLN8-206ENST00000523237 TAPBPO15533 448 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 B4GALT2O60909 372 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 DNAJB6O75190 326 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 STK16O75716 305 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 FAM155BO75949 473 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 URI1O94763 535 aaPredicted RBP15.26■□□□□ 0.03
CLN8-206ENST00000523237 DDAH2O95865 285 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 F10P00742 488 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 RNH1P13489 461 aaKnown RBP15.26■□□□□ 0.03
CLN8-206ENST00000523237 HPDP32754 393 aaPredicted RBP15.26■□□□□ 0.03
CLN8-206ENST00000523237 HSPA7P48741 367 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 SLC7A5Q01650 507 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 H3F3CQ6NXT2 135 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 QSOX2Q6ZRP7 698 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 TBC1D1Q86TI0 1168 aaPredicted RBP15.26■□□□□ 0.03
CLN8-206ENST00000523237 AMER2Q8N7J2 671 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 SNX31Q8N9S9 440 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 PDPRQ8NCN5 879 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 STAG3L4Q8TBR4 150 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 CCT6BQ92526 530 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 GAL3ST3Q96A11 431 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 FAR2Q96K12 515 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 ZNF354BQ96LW1 612 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 PTCHD1Q96NR3 888 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 LRRC1Q9BTT6 524 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 EHD1Q9H4M9 534 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 NT5DC2Q9H857 520 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 MMP25Q9NPA2 562 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 OLAHQ9NV23 265 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 ABI3Q9P2A4 366 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 COPG2Q9UBF2 871 aa15.26■□□□□ 0.03
CLN8-206ENST00000523237 UTP20O75691 2785 aaKnown RBP15.25■□□□□ 0.03
CLN8-206ENST00000523237 A0A088AWK7 358 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 ANKDD1BA6NHY2 528 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 CYSRT1A8MQ03 144 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 PRMT3O60678 531 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 SLC35E2BP0CK96 405 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 EDN3P14138 238 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 ZNF10P21506 573 aaPredicted RBP15.25■□□□□ 0.03
CLN8-206ENST00000523237 CRABP2P29373 138 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 BTN3A2P78410 334 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 GUCY2DQ02846 1103 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 EFTUD2Q15029 972 aaKnown RBP eCLIP15.25■□□□□ 0.03
CLN8-206ENST00000523237 PDK4Q16654 411 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 WHAMMP3Q1A5X7 153 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 FBXO48Q5FWF7 155 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 ACER2Q5QJU3 275 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 CMC1Q7Z7K0 106 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 EXT2Q93063 718 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 ESAMQ96AP7 390 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 PTCD3Q96EY7 689 aaKnown RBP15.25■□□□□ 0.03
CLN8-206ENST00000523237 AICDAQ9GZX7 198 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 NMRAL1Q9HBL8 299 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 PTBP2Q9UKA9 531 aaKnown RBP15.25■□□□□ 0.03
CLN8-206ENST00000523237 SLC5A6Q9Y289 635 aa15.25■□□□□ 0.03
CLN8-206ENST00000523237 LRIT2A6NDA9 550 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 C4orf51C9J302 202 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 E2F3O00716 465 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 CCNT2O60583 730 aaKnown RBP15.24■□□□□ 0.03
CLN8-206ENST00000523237 PRAMEF2O60811 474 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 CLEC3AO75596 197 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 LTA4HP09960 611 aaKnown RBP15.24■□□□□ 0.03
CLN8-206ENST00000523237 TFEBP19484 476 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 HNRNPH1P31943 449 aaKnown RBP15.24■□□□□ 0.03
CLN8-206ENST00000523237 SLC26A5P58743 744 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 TAS2R50P59544 299 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 MEP1AQ16819 746 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 XKR6Q5GH73 641 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 FCRLBQ6BAA4 426 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 BEST3Q8N1M1 668 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 CA13Q8N1Q1 262 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 SLC5A8Q8N695 610 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 ARMC2Q8NEN0 867 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 MS4A6EQ96DS6 147 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 C5orf34Q96MH7 638 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 SLX1AQ9BQ83 275 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 EFCAB11Q9BUY7 163 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 NPLQ9BXD5 320 aaPredicted RBP15.24■□□□□ 0.03
CLN8-206ENST00000523237 RHBGQ9H310 441 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 ALG9Q9H6U8 611 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 PRDM9Q9NQV7 894 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 ZDHHC18Q9NUE0 388 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 NUDT4Q9NZJ9 180 aa15.24■□□□□ 0.03
CLN8-206ENST00000523237 ERRFI1Q9UJM3 462 aaPredicted RBP15.24■□□□□ 0.03
CLN8-206ENST00000523237 ZGRF1Q86YA3 2104 aa15.23■□□□□ 0.03
CLN8-206ENST00000523237 ERI3O43414 337 aaKnown RBP15.23■□□□□ 0.03
CLN8-206ENST00000523237 RASAL1O95294 804 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms