RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 PPT2Q9UMR5 302 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 RUVBL1Q9Y265 456 aaKnown RBP11.35□□□□□ -0.59
PVT1-215ENST00000522963 CCL27Q9Y4X3 112 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 USH1CQ9Y6N9 552 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 SEC16AO15027 2179 aa11.35□□□□□ -0.59
PVT1-215ENST00000522963 HEATR5BQ9P2D3 2071 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 LRIT2A6NDA9 550 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 C4orf51C9J302 202 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 SLCO1B7G3V0H7 640 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 OR2B3O76000 313 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 SLC35G6P0C7Q6 338 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 FGF5P12034 268 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 HSD3B1P14060 373 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 HSD3B2P26439 372 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 HNRNPH1P31943 449 aaKnown RBP11.34□□□□□ -0.59
PVT1-215ENST00000522963 HK2P52789 917 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 ITGA1P56199 1179 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 TMPRSS3P57727 454 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 HMGCS1Q01581 520 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 CSTF3Q12996 717 aaKnown RBP11.34□□□□□ -0.59
PVT1-215ENST00000522963 ADPRMQ3LIE5 342 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.34□□□□□ -0.59
PVT1-215ENST00000522963 XKR7Q5GH72 579 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 TOR1AIP1Q5JTV8 583 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 TCTE1Q5JU00 501 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 C6orf15Q6UXA7 325 aaPredicted RBP11.34□□□□□ -0.59
PVT1-215ENST00000522963 TIPARPQ7Z3E1 657 aaKnown RBP11.34□□□□□ -0.59
PVT1-215ENST00000522963 HOMEZQ8IX15 550 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 ARHGEF39Q8N4T4 335 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 GBP7Q8N8V2 638 aaPredicted RBP11.34□□□□□ -0.59
PVT1-215ENST00000522963 OR2T11Q8NH01 316 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 RFWD2Q8NHY2 731 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 NKD1Q969G9 470 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 C19orf60Q96EN9 201 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 CMTM7Q96FZ5 175 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 PPP1R36Q96LQ0 422 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 F2RL3Q96RI0 385 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 SLC6A16Q9GZN6 736 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 BRF2Q9HAW0 419 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 VTI1BQ9UEU0 232 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 SERTAD3Q9UJW9 196 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 SLC12A4Q9UP95 1085 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 LHX6Q9UPM6 363 aa11.34□□□□□ -0.59
PVT1-215ENST00000522963 MRPS2Q9Y399 296 aaKnown RBP11.34□□□□□ -0.59
PVT1-215ENST00000522963 FITM1A5D6W6 292 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 GMNCA6NCL1 334 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 SLC28A1O00337 649 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 SAP18O00422 153 aaKnown RBP11.33□□□□□ -0.6
PVT1-215ENST00000522963 SDHDO14521 159 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 TXNDC9O14530 226 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 ZSCAN9O15535 394 aaPredicted RBP11.33□□□□□ -0.6
PVT1-215ENST00000522963 SHOX2O60902 331 aaPredicted RBP11.33□□□□□ -0.6
PVT1-215ENST00000522963 SCRG1O75711 98 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 MED26O95402 600 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 TGDSO95455 350 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 ALOX15P16050 662 aaPredicted RBP11.33□□□□□ -0.6
PVT1-215ENST00000522963 DRD4P21917 467 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 PTX3P26022 381 aaPredicted RBP11.33□□□□□ -0.6
PVT1-215ENST00000522963 GCGRP47871 477 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 STXBP1P61764 594 aaKnown RBP11.33□□□□□ -0.6
PVT1-215ENST00000522963 CUL3Q13618 768 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 IMPG1Q17R60 797 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 TUBB8Q3ZCM7 444 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 SLC9B1Q4ZJI4 515 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 DEPDC1Q5TB30 811 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 VWA5B1Q5TIE3 1220 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 KHDRBS2Q5VWX1 349 aaKnown RBP11.33□□□□□ -0.6
PVT1-215ENST00000522963 TMEM214Q6NUQ4 689 aaKnown RBP11.33□□□□□ -0.6
PVT1-215ENST00000522963 CHSY3Q70JA7 882 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 UBE3DQ7Z6J8 389 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 DTX1Q86Y01 620 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 GPR135Q8IZ08 494 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 ZNF655Q8N720 491 aaPredicted RBP11.33□□□□□ -0.6
PVT1-215ENST00000522963 TTC29Q8NA56 475 aaPredicted RBP11.33□□□□□ -0.6
PVT1-215ENST00000522963 OR8K5Q8NH50 307 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 ZCCHC10Q8TBK6 192 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 UTP15Q8TED0 518 aaKnown RBP11.33□□□□□ -0.6
PVT1-215ENST00000522963 KIAA1143Q96AT1 154 aaPredicted RBP11.33□□□□□ -0.6
PVT1-215ENST00000522963 MS4A6EQ96DS6 147 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 CLIP3Q96DZ5 547 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 C10orf90Q96M02 699 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 SERPINI1Q99574 410 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 CCT7Q99832 543 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 NLNQ9BYT8 704 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 REXO4Q9GZR2 422 aaKnown RBP11.33□□□□□ -0.6
PVT1-215ENST00000522963 MEAF6Q9HAF1 191 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 NPHS2Q9NP85 383 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 VPS29Q9UBQ0 182 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 GIMAP2Q9UG22 337 aa11.33□□□□□ -0.6
PVT1-215ENST00000522963 TMEM184BQ9Y519 407 aaPredicted RBP11.33□□□□□ -0.6
PVT1-215ENST00000522963 A0A0G2JN53 185 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 LOC101059948A0A1B0GTJ6 334 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 ATP6AP2A0A1C7CYW4 349 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 HYKKA2RU49 373 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 TRPC5OSA6NMA1 111 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.32□□□□□ -0.6
PVT1-215ENST00000522963 RTCAO00442 366 aaKnown RBP11.32□□□□□ -0.6
PVT1-215ENST00000522963 LSM1O15116 133 aaKnown RBP11.32□□□□□ -0.6
PVT1-215ENST00000522963 ERI3O43414 337 aaKnown RBP11.32□□□□□ -0.6
PVT1-215ENST00000522963 RGS14O43566 566 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms