RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 PLCL2Q9UPR0 1127 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 LAMA1P25391 3075 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 CHD6Q8TD26 2715 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 C4orf47A7E2U8 309 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 CAPN14A8MX76 684 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 P2RX6O15547 441 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 SH3BP5O60239 455 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 PCDH7O60245 1069 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 PRMT3O60678 531 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 PRAMEF10O60809 474 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 SCELO95171 688 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 SERPIND1P05546 499 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 BCKDHAP12694 445 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 NELFEP18615 380 aaKnown RBP12.44□□□□□ -0.42
CPNE3-205ENST00000522240 GPX3P22352 226 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 JAK1P23458 1154 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 PIK3R1P27986 724 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 ARL4DP49703 201 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 RAE1P78406 368 aaKnown RBP12.44□□□□□ -0.42
CPNE3-205ENST00000522240 TRA2AQ13595 282 aaKnown RBP eCLIP12.44□□□□□ -0.42
CPNE3-205ENST00000522240 RPS6KA2Q15349 733 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 MAPRE2Q15555 327 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 ZSCAN26Q16670 478 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 TOR1AIP1Q5JTV8 583 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 TCTE1Q5JU00 501 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 TMTC4Q5T4D3 741 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 TRIM40Q6P9F5 258 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 CYP20A1Q6UW02 462 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 USP53Q70EK8 1073 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 NUDT13Q86X67 352 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 D2HGDHQ8N465 521 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 LIX1Q8N485 282 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 CSNK1A1LQ8N752 337 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 MS4A6EQ96DS6 147 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 KCNC2Q96PR1 638 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 F2RL3Q96RI0 385 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 ZNF717Q9BY31 904 aaPredicted RBP12.44□□□□□ -0.42
CPNE3-205ENST00000522240 ROGDIQ9GZN7 287 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 AICDAQ9GZX7 198 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 ARMCX1Q9P291 453 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 KLHL3Q9UH77 587 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 ATXN7L1Q9ULK2 861 aaPredicted RBP12.44□□□□□ -0.42
CPNE3-205ENST00000522240 G3BP2Q9UN86 482 aaKnown RBP12.44□□□□□ -0.42
CPNE3-205ENST00000522240 MAPRE3Q9UPY8 281 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 DLGAP4Q9Y2H0 992 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 RP1P56715 2156 aa12.44□□□□□ -0.42
CPNE3-205ENST00000522240 MAP1BP46821 2468 aaKnown RBP12.44□□□□□ -0.42
CPNE3-205ENST00000522240 COL27A1Q8IZC6 1860 aaPredicted RBP12.43□□□□□ -0.42
CPNE3-205ENST00000522240 PSMD12O00232 456 aaPredicted RBP12.43□□□□□ -0.42
CPNE3-205ENST00000522240 ANKRD28O15084 1053 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 ERI3O43414 337 aaKnown RBP12.43□□□□□ -0.42
CPNE3-205ENST00000522240 G6PDP11413 515 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 BSGP35613 385 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 SSR2P43308 183 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 ASMTP46597 345 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 LIMK1P53667 647 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 C21orf58P58505 322 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 ZNF763Q0D2J5 394 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 SPIDRQ14159 915 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 PRTGQ2VWP7 1150 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 DEFB110Q30KQ9 67 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 TMEM214Q6NUQ4 689 aaKnown RBP12.43□□□□□ -0.42
CPNE3-205ENST00000522240 ABHD17CQ6PCB6 329 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 ABHD13Q7L211 337 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 TMPRSS9Q7Z410 1059 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 ARHGAP22Q7Z5H3 698 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 UBE3DQ7Z6J8 389 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 PIP4P1Q86T03 277 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 MCATQ8IVS2 390 aaKnown RBP12.43□□□□□ -0.42
CPNE3-205ENST00000522240 SLITRK4Q8IW52 837 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 ZCCHC7Q8N3Z6 543 aaKnown RBP12.43□□□□□ -0.42
CPNE3-205ENST00000522240 STARD8Q92502 1023 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 HS3ST6Q96QI5 342 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 RTKNQ9BST9 563 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 TBCDQ9BTW9 1192 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 SYNDIG1Q9H7V2 258 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 DDX31Q9H8H2 851 aaKnown RBP12.43□□□□□ -0.42
CPNE3-205ENST00000522240 LHX9Q9NQ69 397 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 CEP295Q9C0D2 2601 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 ASXL3Q9C0F0 2248 aa12.43□□□□□ -0.42
CPNE3-205ENST00000522240 A0A088AWK7 358 aa12.42□□□□□ -0.42
CPNE3-205ENST00000522240 LOC105369274A0A096LPK9 316 aa12.42□□□□□ -0.42
CPNE3-205ENST00000522240 LOC102723532A0A0G2JNH3 316 aa12.42□□□□□ -0.42
CPNE3-205ENST00000522240 IGHV5-10-1A0A0J9YXX1 117 aa12.42□□□□□ -0.42
CPNE3-205ENST00000522240 FITM1A5D6W6 292 aa12.42□□□□□ -0.42
CPNE3-205ENST00000522240 C4orf51C9J302 202 aa12.42□□□□□ -0.42
CPNE3-205ENST00000522240 SAP18O00422 153 aaKnown RBP12.42□□□□□ -0.42
CPNE3-205ENST00000522240 SH3BGRLO75368 114 aa12.42□□□□□ -0.42
CPNE3-205ENST00000522240 UBOX5O94941 541 aa12.42□□□□□ -0.42
CPNE3-205ENST00000522240 ANXA4P09525 319 aaPredicted RBP12.42□□□□□ -0.42
CPNE3-205ENST00000522240 SMIM10L1P0DMW3 83 aa12.42□□□□□ -0.42
CPNE3-205ENST00000522240 ZNF10P21506 573 aaPredicted RBP12.42□□□□□ -0.42
CPNE3-205ENST00000522240 TPP2P29144 1249 aaPredicted RBP12.42□□□□□ -0.42
CPNE3-205ENST00000522240 CLNS1AP54105 237 aaKnown RBP12.42□□□□□ -0.42
CPNE3-205ENST00000522240 CLDN8P56748 225 aa12.42□□□□□ -0.42
CPNE3-205ENST00000522240 VSX2P58304 361 aaPredicted RBP12.42□□□□□ -0.42
CPNE3-205ENST00000522240 TRA2BP62995 288 aaKnown RBP12.42□□□□□ -0.42
CPNE3-205ENST00000522240 RCAN2Q14206 197 aa12.42□□□□□ -0.42
CPNE3-205ENST00000522240 STPG1Q5TH74 334 aa12.42□□□□□ -0.42
CPNE3-205ENST00000522240 GARNL3Q5VVW2 1013 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms