RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 SSTR1P30872 391 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 CD96P40200 585 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 GDF5P43026 501 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 MRPS25P82663 173 aaKnown RBP17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 OC90Q02509 493 aaPredicted RBP17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 HYAL2Q12891 473 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 TGFBIQ15582 683 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 OR1C1Q15619 314 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.33■□□□□ 0.363e-12■□□□□ 8.7
TOP1MT-216ENST00000522121 TMIGD1Q6UXZ0 262 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 SLCO4C1Q6ZQN7 724 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 KLHDC8AQ8IYD2 350 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 TMEM178AQ8NBL3 297 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 MDS2Q8NDY4 140 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 CREB3L4Q8TEY5 395 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 CPNE1Q99829 537 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 PITHD1Q9GZP4 211 aaPredicted RBP17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 KLHL31Q9H511 634 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 PRDM9Q9NQV7 894 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 SMYD2Q9NRG4 433 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 ANKRD10Q9NXR5 420 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 POLEQ07864 2286 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 SCN3AQ9NY46 2000 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 CPAMD8Q8IZJ3 1885 aa17.33■□□□□ 0.36
TOP1MT-216ENST00000522121 UNC79Q9P2D8 2635 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 A0A088AWK7 358 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 CTAGE15A4D2H0 777 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 CDK2AP1O14519 115 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 PIAS1O75925 651 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 CCDC166P0CW27 439 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 SMIM10L1P0DMW3 83 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 STMN1P16949 149 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 ZNF10P21506 573 aaPredicted RBP17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 MST1P26927 711 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 EEF1DP29692 281 aaKnown RBP17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 HPDP32754 393 aaPredicted RBP17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 SLC6A12P48065 614 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 BTN3A2P78410 334 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 BTG2P78543 158 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 C18orf21Q32NC0 220 aaPredicted RBP17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 CYS1Q717R9 158 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 CTAGE6Q86UF2 777 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 RPS19BP1Q86WX3 136 aaKnown RBP17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 GPSM1Q86YR5 675 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 SPATA4Q8NEY3 305 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 ELP5Q8TE02 316 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 CCT6BQ92526 530 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 GAL3ST3Q96A11 431 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 SMIM10Q96HG1 83 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 SEC16BQ96JE7 1060 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 SIGLEC12Q96PQ1 595 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 NPAS2Q99743 824 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 UNKQ9C0B0 810 aaKnown RBP17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 CDCP1Q9H5V8 836 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 CAB39LQ9H9S4 337 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 KLHL1Q9NR64 748 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 WWOXQ9NZC7 414 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 GPRC5BQ9NZH0 403 aa17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 SUCOQ9UBS9 1254 aaKnown RBP17.32■□□□□ 0.36
TOP1MT-216ENST00000522121 TRGV8A0A0C4DH27 118 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 ANKDD1BA6NHY2 528 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 SAGE2PA6NJ88 616 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 CXorf49A8MYA2 514 aaPredicted RBP17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 CLGNO14967 610 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 GSTA2P09210 222 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 MAOAP21397 527 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 GP5P40197 560 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 CASP6P55212 293 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 ATP6V0D1P61421 351 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 PMP22Q01453 160 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 SLBPQ14493 270 aaKnown RBP eCLIP17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 CDKL4Q5MAI5 379 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 SPINK14Q6IE38 97 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 C3orf62Q6ZUJ4 267 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 SLC34A3Q8N130 599 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 CA13Q8N1Q1 262 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 SPATA6LQ8N4H0 392 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 FAM98AQ8NCA5 519 aaKnown RBP17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 RBBP8Q99708 897 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 NT5DC2Q9H857 520 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 DNAJC11Q9NVH1 559 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 UTP11Q9Y3A2 253 aaKnown RBP17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 MMACHCQ9Y4U1 282 aa17.31■□□□□ 0.36
TOP1MT-216ENST00000522121 IGKV3D-11A0A0A0MRZ8 115 aa17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 TCRBV9S1A1TA0A576 114 aa17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 TCRBV16S1A1N1A0A5B0 115 aa17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 FAM227AF5H4B4 570 aa17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 FANCGO15287 622 aa17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 PHGDHO43175 533 aaKnown RBP17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 ERI3O43414 337 aaKnown RBP17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 RAD51CO43502 376 aa17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 MAN1A2O60476 641 aa17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 S100BP04271 92 aaPredicted RBP17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 GGT5P36269 586 aa17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 SRSF11Q05519 484 aaKnown RBP17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 SULT1C3Q6IMI6 304 aa17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 MTFR2Q6P444 385 aa17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 KIF2BQ8N4N8 673 aa17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 SCMH1Q96GD3 660 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms