RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 KIAA0754O94854 1291 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 NELFEP18615 380 aaKnown RBP20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 GABRA4P48169 554 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 ACADVLP49748 655 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 SPIDRQ14159 915 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 CCDC157Q569K6 752 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 MANEAQ5SRI9 462 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 GK5Q6ZS86 529 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 ASCL5Q7RTU5 278 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 NUDT13Q86X67 352 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 FAM9CQ8IZT9 166 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 D2HGDHQ8N465 521 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 POU5F2Q8N7G0 328 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 CMTM5Q96DZ9 223 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 EGLN2Q96KS0 407 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 CCDC74BQ96LY2 380 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 TEFMQ96QE5 360 aaKnown RBP20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 CDC6Q99741 560 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 TBCDQ9BTW9 1192 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 TUBB6Q9BUF5 446 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 ZNF717Q9BY31 904 aaPredicted RBP20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 ACTL8Q9H568 366 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 PDP2Q9P2J9 529 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 TAGLN3Q9UI15 199 aa20.34■□□□□ 0.85
R3HCC1-208ENST00000522012 NTN3O00634 580 aaPredicted RBP20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 TXNDC9O14530 226 aa20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 ANKRD28O15084 1053 aa20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 B3GALT4O96024 378 aa20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 THRAP10827 490 aa20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 ESRRAP11474 423 aaPredicted RBP20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 COX4I1P13073 169 aa20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 TPP2P29144 1249 aaPredicted RBP20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 BTN3A2P78410 334 aa20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 BNIP1Q12981 228 aa20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 PHF19Q5T6S3 580 aa20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 STPG1Q5TH74 334 aa20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 ABHD13Q7L211 337 aa20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 SNX32Q86XE0 403 aa20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 KRTCAP2Q8N6L1 136 aa20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 PROKR1Q8TCW9 393 aa20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 UTP15Q8TED0 518 aaKnown RBP20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 GFM2Q969S9 779 aaKnown RBP20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 ZBTB18Q99592 522 aa20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 PRDM7Q9NQW5 492 aa20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 ADAM29Q9UKF5 820 aa20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 ARID1BQ8NFD5 2236 aaPredicted RBP20.33■□□□□ 0.85
R3HCC1-208ENST00000522012 D6RAR5 112 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 NR5A2O00482 541 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 AKAP10O43572 662 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 LRATO95237 230 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 ANKRD34CP0C6C1 535 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 T-ENOLP0DO92 83 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 FOLR1P15328 257 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 PCSK2P16519 638 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 PRDX6P30041 224 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 ARFIP1P53367 373 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 MAPK12P53778 367 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 CLDN8P56748 225 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 ZNF763Q0D2J5 394 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 COL9A2Q14055 689 aaPredicted RBP20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 CYLC2Q14093 348 aaPredicted RBP20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 MAPRE2Q15555 327 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 GPR19Q15760 415 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 ARHGAP22Q7Z5H3 698 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 FUNDC1Q8IVP5 155 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 AMER3Q8N944 861 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 RCBTB1Q8NDN9 531 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 OR8K5Q8NH50 307 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 C16orf78Q8WTQ4 265 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 DDX31Q9H8H2 851 aaKnown RBP20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 COPS7BQ9H9Q2 264 aaPredicted RBP20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 AGRPO00253 132 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 KLHL18O94889 574 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 SNRPB2P08579 225 aaKnown RBP20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 JAK1P23458 1154 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 ATP5A1P25705 553 aaKnown RBP20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 IL12AP29459 219 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 ASMTP46597 345 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 CPA2P48052 419 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 POLR2JP52435 117 aaKnown RBP20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 HERC3Q15034 1050 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 TMEM214Q6NUQ4 689 aaKnown RBP20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 ZNF793Q6ZN11 406 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 RP9Q8TA86 221 aaKnown RBP20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 NUDT8Q8WV74 236 aa20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 SPRTNQ9H040 489 aaPredicted RBP20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 MRPS2Q9Y399 296 aaKnown RBP20.32■□□□□ 0.84
R3HCC1-208ENST00000522012 ZFHX2Q9C0A1 2572 aaPredicted RBP20.31■□□□□ 0.84
R3HCC1-208ENST00000522012 FAM234BA2RU67 622 aa20.31■□□□□ 0.84
R3HCC1-208ENST00000522012 TMEM150CB9EJG8 249 aa20.31■□□□□ 0.84
R3HCC1-208ENST00000522012 HIST1H1TP22492 207 aaPredicted RBP20.31■□□□□ 0.84
R3HCC1-208ENST00000522012 KCNK10P57789 538 aa20.31■□□□□ 0.84
R3HCC1-208ENST00000522012 TAS2R50P59544 299 aa20.31■□□□□ 0.84
R3HCC1-208ENST00000522012 SNRPNP63162 240 aaKnown RBP20.31■□□□□ 0.84
R3HCC1-208ENST00000522012 PRTGQ2VWP7 1150 aa20.31■□□□□ 0.84
R3HCC1-208ENST00000522012 DEFB134Q4QY38 66 aa20.31■□□□□ 0.84
R3HCC1-208ENST00000522012 TCTE1Q5JU00 501 aa20.31■□□□□ 0.84
R3HCC1-208ENST00000522012 ACOT4Q8N9L9 421 aa20.31■□□□□ 0.84
R3HCC1-208ENST00000522012 ZNF285Q96NJ3 590 aa20.31■□□□□ 0.84
R3HCC1-208ENST00000522012 TMEM74Q96NL1 305 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms