RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 WASF3Q9UPY6 502 aa22.95■■□□□ 1.26
PVT1-212ENST00000521951 ATP6AP2A0A1C7CYW4 349 aa22.94■■□□□ 1.26
PVT1-212ENST00000521951 TRPC5OSA6NMA1 111 aa22.94■■□□□ 1.26
PVT1-212ENST00000521951 RTCAO00442 366 aaKnown RBP22.94■■□□□ 1.26
PVT1-212ENST00000521951 FOXS1O43638 330 aa22.94■■□□□ 1.26
PVT1-212ENST00000521951 ATP6AP2O75787 350 aa22.94■■□□□ 1.26
PVT1-212ENST00000521951 ZNF28P17035 718 aa22.94■■□□□ 1.26
PVT1-212ENST00000521951 ALAS2P22557 587 aa22.94■■□□□ 1.26
PVT1-212ENST00000521951 TGM3Q08188 693 aa22.94■■□□□ 1.26
PVT1-212ENST00000521951 HERC3Q15034 1050 aa22.94■■□□□ 1.26
PVT1-212ENST00000521951 SPDYAQ5MJ70 313 aa22.94■■□□□ 1.26
PVT1-212ENST00000521951 TMEM164Q5U3C3 297 aa22.94■■□□□ 1.26
PVT1-212ENST00000521951 RHBDD2Q6NTF9 364 aa22.94■■□□□ 1.26
PVT1-212ENST00000521951 PRSS41Q7RTY9 318 aa22.94■■□□□ 1.26
PVT1-212ENST00000521951 METTL4Q8N3J2 472 aa22.94■■□□□ 1.26
PVT1-212ENST00000521951 THOC1Q96FV9 657 aaKnown RBP22.94■■□□□ 1.26
PVT1-212ENST00000521951 SLC46A1Q96NT5 459 aa22.94■■□□□ 1.26
PVT1-212ENST00000521951 SORBS1Q9BX66 1292 aaKnown RBP22.94■■□□□ 1.26
PVT1-212ENST00000521951 NRSN2Q9GZP1 204 aa22.94■■□□□ 1.26
PVT1-212ENST00000521951 LHX9Q9NQ69 397 aa22.94■■□□□ 1.26
PVT1-212ENST00000521951 PRDM7Q9NQW5 492 aa22.94■■□□□ 1.26
PVT1-212ENST00000521951 NPIPB8E9PQR5 432 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 SDHDO14521 159 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 DSCR3O14972 297 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 RSL1D1O76021 490 aaKnown RBP22.93■■□□□ 1.26
PVT1-212ENST00000521951 KIAA0754O94854 1291 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 HBQ1P09105 142 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 ALOX15P16050 662 aaPredicted RBP22.93■■□□□ 1.26
PVT1-212ENST00000521951 IL1RNP18510 177 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 PRPH2P23942 346 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 ARFIP1P53367 373 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 NR6A1Q15406 480 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 TUBB8Q3ZCM7 444 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 DEFB134Q4QY38 66 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 OR4C11Q6IEV9 310 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 CGB2Q6NT52 195 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 CHTF18Q8WVB6 975 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 CLIP3Q96DZ5 547 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 APIPQ96GX9 242 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 QRFPRQ96P65 431 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 KCNC2Q96PR1 638 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 TBCDQ9BTW9 1192 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 ZNF717Q9BY31 904 aaPredicted RBP22.93■■□□□ 1.26
PVT1-212ENST00000521951 B3GNT4Q9C0J1 378 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 ANKHQ9HCJ1 492 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 NPHS2Q9NP85 383 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 TXLNGQ9NUQ3 528 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 RIC8BQ9NVN3 520 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 AHSPQ9NZD4 102 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 GIMAP2Q9UG22 337 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 NDOR1Q9UHB4 597 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 FER1L5A0AVI2 2057 aa22.93■■□□□ 1.26
PVT1-212ENST00000521951 A0A0A6YYC8 382 aaPredicted RBP22.92■■□□□ 1.26
PVT1-212ENST00000521951 GMNCA6NCL1 334 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 I3L1I5 382 aaPredicted RBP22.92■■□□□ 1.26
PVT1-212ENST00000521951 LSM1O15116 133 aaKnown RBP22.92■■□□□ 1.26
PVT1-212ENST00000521951 SPINK2P20155 84 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 BSGP35613 385 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 BTN3A2P78410 334 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 AP5B1Q2VPB7 878 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 SLC9B1Q4ZJI4 515 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 MTERF4Q7Z6M4 381 aaKnown RBP22.92■■□□□ 1.26
PVT1-212ENST00000521951 PDSS2Q86YH6 399 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 C1orf52Q8N6N3 182 aaKnown RBP22.92■■□□□ 1.26
PVT1-212ENST00000521951 OR9A4Q8NGU2 314 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 TUBGCP3Q96CW5 907 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 SCNM1Q9BWG6 230 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 TRIM55Q9BYV6 548 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 ULBP3Q9BZM4 244 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 WDR55Q9H6Y2 383 aaPredicted RBP22.92■■□□□ 1.26
PVT1-212ENST00000521951 LRTM1Q9HBL6 345 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 C1orf109Q9NX04 203 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 FOXJ2Q9P0K8 574 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 NAALAD2Q9Y3Q0 740 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 A0A1B0GX78 115 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 GALR3O60755 368 aaPredicted RBP22.92■■□□□ 1.26
PVT1-212ENST00000521951 CPNE3O75131 537 aaKnown RBP22.92■■□□□ 1.26
PVT1-212ENST00000521951 PEX11AO75192 247 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 SEC22BO75396 215 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 KLHL18O94889 574 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 AQP5P55064 265 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 C1orf189Q5VU69 101 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 EPGNQ6UW88 154 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 ZNF793Q6ZN11 406 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 AMER3Q8N944 861 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 RFWD2Q8NHY2 731 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 AKTIPQ9H8T0 292 aa22.92■■□□□ 1.26
PVT1-212ENST00000521951 GOLGA8QA0A0J9YX86 632 aa22.91■■□□□ 1.26
PVT1-212ENST00000521951 GOLGA8OA6NCC3 632 aa22.91■■□□□ 1.26
PVT1-212ENST00000521951 GOLGA8NF8WBI6 632 aa22.91■■□□□ 1.26
PVT1-212ENST00000521951 NVLO15381 856 aaKnown RBP22.91■■□□□ 1.26
PVT1-212ENST00000521951 NSA2O95478 260 aaKnown RBP22.91■■□□□ 1.26
PVT1-212ENST00000521951 ATP5A1P25705 553 aaKnown RBP22.91■■□□□ 1.26
PVT1-212ENST00000521951 RBMS1P29558 406 aaKnown RBP22.91■■□□□ 1.26
PVT1-212ENST00000521951 SSR2P43308 183 aa22.91■■□□□ 1.26
PVT1-212ENST00000521951 ACSM2AQ08AH3 577 aa22.91■■□□□ 1.26
PVT1-212ENST00000521951 RTP5Q14D33 572 aa22.91■■□□□ 1.26
PVT1-212ENST00000521951 KIAA0040Q15053 153 aa22.91■■□□□ 1.26
PVT1-212ENST00000521951 GALNTL6Q49A17 601 aa22.91■■□□□ 1.26
PVT1-212ENST00000521951 SPIN4Q56A73 249 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms