RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 CCDC91Q7Z6B0 441 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 TREML1Q86YW5 311 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 LIX1LQ8IVB5 337 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 DENND6AQ8IWF6 608 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 CNTN4Q8IWV2 1026 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 AVL9Q8NBF6 648 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 OR11G2Q8NGC1 345 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 PPP1R14CQ8TAE6 165 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 PPP1R2P1Q96PQ5 205 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 TUBB6Q9BUF5 446 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 MAGEH1Q9H213 219 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 LRMDAQ9H2I8 198 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 RETREG1Q9H6L5 497 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 SP110Q9HB58 689 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 NOD2Q9HC29 1040 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 PTGFRNQ9P2B2 879 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 MARCOQ9UEW3 520 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 BAIAP2L1Q9UHR4 511 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 CD84Q9UIB8 345 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 FBXO5Q9UKT4 447 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 RUVBL2Q9Y230 463 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 STK38LQ9Y2H1 464 aa6.92□□□□□ -1.3
CTNNA1-227ENST00000521387 DNAJC13O75165 2243 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 FAM95CA0A1B0GW59 222 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 SLC9B1P1A6NJY1 282 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 CAPN14A8MX76 684 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 TMEM150CB9EJG8 249 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 ZNF195O14628 629 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 PRRG2O14669 202 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 AURKAO14965 403 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 PHGDHO43175 533 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 PRAMEF11O60813 436 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 CNOT4O95628 575 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 CTSBP07858 339 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 FAM157CP0CG43 387 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 CYP2A7P20853 494 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 SAT1P21673 171 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 SLC1A2P43004 574 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 MAPKAPK2P49137 400 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 KPNA2P52292 529 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 AQP5P55064 265 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 TAS2R39P59534 338 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 THOC5Q13769 683 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 ITGA9Q13797 1035 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 USP10Q14694 798 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 SIRPB2Q5JXA9 342 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 IRAK1BP1Q5VVH5 260 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 KIAA0930Q6ICG6 404 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 NEPROQ6NW34 567 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 CNSTQ6PJW8 725 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 ABRAXAS1Q6UWZ7 409 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 USP45Q70EL2 814 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 MAVSQ7Z434 540 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 TSPAN33Q86UF1 283 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 C2CD4AQ8NCU7 369 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 BRIX1Q8TDN6 353 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 KCTD4Q8WVF5 259 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 RND1Q92730 232 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 NXNL1Q96CM4 212 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 GPR78Q96P69 363 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 RAB3IPQ96QF0 476 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 TUBGCP5Q96RT8 1024 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 EBF4Q9BQW3 602 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 GATA5Q9BWX5 397 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 FSD1LQ9BXM9 530 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 NMUR2Q9GZQ4 415 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 PDFQ9HBH1 243 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 NMRAL1Q9HBL8 299 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 POT1Q9NUX5 634 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 NSMCE4AQ9NXX6 385 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 ARMCX1Q9P291 453 aa6.91□□□□□ -1.3
CTNNA1-227ENST00000521387 LOC285095A0A1B0GVY8 99 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 UBA6A0AVT1 1052 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 ASPDHA6ND91 283 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 MBD3L4A6NDZ8 208 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 MROH6A6NGR9 719 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 MBD3L5A6NJ08 208 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 TARM1B6A8C7 271 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 CCL22O00626 93 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 CHUKO15111 745 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 HCRTR1O43613 425 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 TRIM13O60858 407 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 RAMP2O60895 175 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 SLC35E2BP0CK96 405 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 ITGAXP20702 1163 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 GRK2P25098 689 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 VIPR1P32241 457 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 IDH3AP50213 366 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 NUP107P57740 925 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 ALDH6A1Q02252 535 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 ZNF460Q14592 562 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 PTPRCAPQ14761 206 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 PARP15Q460N3 678 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 CHRFAM7AQ494W8 412 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 RBM20Q5T481 1227 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 ACBD5Q5T8D3 534 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 ZYG11AQ6WRX3 759 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 RAPH1Q70E73 1250 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 TRIM48Q8IWZ4 208 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms