RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 ACRP10323 421 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 ARSIQ5FYB1 569 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 SLC8B1Q6J4K2 584 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 USP30Q70CQ3 517 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 OR5K1Q8NHB7 308 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 DUSP26Q9BV47 211 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 C1orf21Q9H246 121 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 NTN4Q9HB63 628 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 NUDT15Q9NV35 164 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 ECI2O75521 394 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 RAB3AP20336 220 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 CD72P21854 359 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 SLC6A4P31645 630 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 CBLBQ13191 982 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 DPY19L1Q2PZI1 675 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 ADGRF1Q5T601 910 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 ZNF773Q6PK81 442 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 ZDHHC21Q8IVQ6 265 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 FBXO15Q8NCQ5 510 aaPredicted RBP11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 EBF4Q9BQW3 602 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 RNF39Q9H2S5 420 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 NUP188Q5SRE5 1749 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 TEX13DA0A0J9YY54 714 aaPredicted RBP11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 A0A1W2PRU2 124 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 A8MV72 311 aaPredicted RBP11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 CXorf49A8MYA2 514 aaPredicted RBP11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 HSPA12AO43301 675 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 HRGP04196 525 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 SBK2P0C263 348 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 CBSLP0DN79 551 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 ANXA3P12429 323 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 BCKDHAP12694 445 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 CBSP35520 551 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 TXNRD3NBQ6F5E7 133 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 SIGIRRQ6IA17 410 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 TAS1R3Q7RTX0 852 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 OSTM1Q86WC4 334 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 ESAMQ96AP7 390 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 RBM18Q96H35 190 aaKnown RBP11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 SLC30A2Q9BRI3 323 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 GPR88Q9GZN0 384 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 MRM3Q9HC36 420 aaKnown RBP11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 C11orf16Q9NQ32 467 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 TMEM184CQ9NVA4 438 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 DAPL1A0PJW8 107 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 WNT9AO14904 365 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 DENRO43583 198 aaKnown RBP11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 PI15O43692 258 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 MT-ND1P03886 318 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 SLC2A2P11168 524 aaPredicted RBP11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 RPS24P62847 133 aaKnown RBP11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 ESCO2Q56NI9 601 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 ZNF598Q86UK7 904 aaKnown RBP11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 ZNF611Q8N823 705 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 SGTBQ96EQ0 304 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 HBEGFQ99075 208 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 A0A0U1RQF3 1178 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 ALPIP09923 528 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 DNAJB1P25685 340 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 CCND3P30281 292 aaPredicted RBP11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 GRIA1P42261 906 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 TPMTP51580 245 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 POLR2HP52434 150 aaKnown RBP11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 MTPNP58546 118 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 FLI1Q01543 452 aaPredicted RBP11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 GRIK2Q13002 908 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 UAP1L1Q3KQV9 507 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 ZC3H3Q8IXZ2 948 aaKnown RBP11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 FANK1Q8TC84 345 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 SNAPC3Q92966 411 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 ZFP3Q96NJ6 502 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 USB1Q9BQ65 265 aaKnown RBP11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 POLMQ9NP87 494 aaPredicted RBP11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 TMEM59LQ9UK28 342 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 NDRG2Q9UN36 371 aaKnown RBP11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 PCDHB11Q9Y5F2 797 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 CCDC85CA6NKD9 419 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 SLITRK5O94991 958 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 ITGB1P05556 798 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 CD36P16671 472 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 RAB4AP20338 218 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 VIPR1P32241 457 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 CDH15P55291 814 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 MLC1Q15049 377 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 SLC35G1Q2M3R5 365 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 AHSA2Q719I0 299 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 AMZ2Q86W34 360 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 PDZD9Q8IXQ8 264 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 C3orf49Q96BT1 292 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 CCM2Q9BSQ5 444 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 FAM86C1Q9NVL1 165 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 DNAJB9Q9UBS3 223 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 OR6C6A6NF89 314 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 KDELR3O43731 214 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 GADD45GO95257 159 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 PRKCGP05129 697 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 PET100P0DJ07 73 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 SLC7A1P30825 629 aa11.72□□□□□ -0.53
ERGIC1-208ENST00000520399 RAB5CP51148 216 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms