RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 PACS1Q6VY07 963 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 TAX1BP1Q86VP1 789 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 SLC22A16Q86VW1 577 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 RPS19BP1Q86WX3 136 aaKnown RBP4.57□□□□□ -1.68
SDCBP-207ENST00000520168 CXorf67Q86X51 503 aaPredicted RBP4.57□□□□□ -1.68
SDCBP-207ENST00000520168 TMEM139Q8IV31 216 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 WDR75Q8IWA0 830 aaKnown RBP4.57□□□□□ -1.68
SDCBP-207ENST00000520168 ZC3H7AQ8IWR0 971 aaKnown RBP4.57□□□□□ -1.68
SDCBP-207ENST00000520168 SULF2Q8IWU5 870 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 REXO1L1PQ8IX06 675 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 CCDC170Q8IYT3 715 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 SLC22A15Q8IZD6 547 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 RPRMLQ8N4K4 120 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 SLC25A41Q8N5S1 370 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 PQLC3Q8N755 202 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 PLD5Q8N7P1 536 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 HMGCLL1Q8TB92 370 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 MAGEC3Q8TD91 643 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 UBASH3BQ8TF42 649 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 ASZ1Q8WWH4 475 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 SARAFQ96BY9 339 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 Q96MF0 132 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 PPP1R2P1Q96PQ5 205 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 RNF157Q96PX1 679 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 FCRL5Q96RD9 977 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 NPAS2Q99743 824 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 SH3GL2Q99962 352 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 YIPF4Q9BSR8 244 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 MAK16Q9BXY0 300 aaKnown RBP4.57□□□□□ -1.68
SDCBP-207ENST00000520168 VN1R1Q9GZP7 353 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 ADAM19Q9H013 955 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 RASSF4Q9H2L5 321 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 ZDHHC11Q9H8X9 412 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 ZNHIT6Q9NWK9 470 aaKnown RBP4.57□□□□□ -1.68
SDCBP-207ENST00000520168 UBP1Q9NZI7 540 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 CPSF2Q9P2I0 782 aaKnown RBP4.57□□□□□ -1.68
SDCBP-207ENST00000520168 ZNF629Q9UEG4 869 aaPredicted RBP4.57□□□□□ -1.68
SDCBP-207ENST00000520168 SLC39A10Q9ULF5 831 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 CAPN11Q9UMQ6 739 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.57□□□□□ -1.68
SDCBP-207ENST00000520168 KLHL20Q9Y2M5 609 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 PPP2R2CQ9Y2T4 447 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 HEY1Q9Y5J3 304 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 DSCAMO60469 2012 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 MEGF8Q7Z7M0 2845 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 LOC105369274A0A096LPK9 316 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 LOC102723532A0A0G2JNH3 316 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 A0A1B0GVC2 190 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 OR2A25A4D2G3 310 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 NPIPA2E9PIF3 369 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 NPIPA3F8WFD2 350 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 AQP7O14520 342 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 APOL1O14791 398 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 ZNHIT1O43257 154 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 BUD23O43709 281 aaKnown RBP4.56□□□□□ -1.68
SDCBP-207ENST00000520168 TLX2O43763 284 aaPredicted RBP4.56□□□□□ -1.68
SDCBP-207ENST00000520168 PEX1O43933 1283 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 SUSD5O60279 629 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 TMCC2O75069 709 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 ANXA9O76027 345 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 SLU7O95391 586 aaKnown RBP4.56□□□□□ -1.68
SDCBP-207ENST00000520168 NSA2O95478 260 aaKnown RBP4.56□□□□□ -1.68
SDCBP-207ENST00000520168 IGHG3P01860 377 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 GYPCP04921 128 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 EZRP15311 586 aaKnown RBP4.56□□□□□ -1.68
SDCBP-207ENST00000520168 FPR1P21462 350 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 EPHA1P21709 976 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 KDELR1P24390 212 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 PSMA3P25788 255 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 TPP2P29144 1249 aaPredicted RBP4.56□□□□□ -1.68
SDCBP-207ENST00000520168 CMPK1P30085 196 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 MC4RP32245 332 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 CCNFP41002 786 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 PRKCIP41743 596 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 ZNF140P52738 457 aaPredicted RBP4.56□□□□□ -1.68
SDCBP-207ENST00000520168 ITGA8P53708 1063 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 GEMP55040 296 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 SESN3P58005 492 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 ZBED6P86452 979 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 MPP1Q00013 466 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 ACTN3Q08043 901 aaPredicted RBP4.56□□□□□ -1.68
SDCBP-207ENST00000520168 USP10Q14694 798 aaKnown RBP4.56□□□□□ -1.68
SDCBP-207ENST00000520168 NOMO1Q15155 1222 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 CPSF6Q16630 551 aaKnown RBP eCLIP4.56□□□□□ -1.68
SDCBP-207ENST00000520168 TMEM95Q3KNT9 176 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 MINDY4Q4G0A6 757 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 ODF2Q5BJF6 829 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 C1orf185Q5T7R7 199 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 WLSQ5T9L3 541 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 KAZNQ674X7 775 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 HEPHL1Q6MZM0 1159 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 FDX2Q6P4F2 183 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 PAPD4Q6PIY7 484 aaKnown RBP4.56□□□□□ -1.68
SDCBP-207ENST00000520168 SUSD1Q6UWL2 747 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 LANCL3Q6ZV70 420 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 MAATS1Q7Z4T9 603 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 ANKRD37Q7Z713 158 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 YTHDF3Q7Z739 585 aaKnown RBP4.56□□□□□ -1.68
SDCBP-207ENST00000520168 JAZF1Q86VZ6 243 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 SERPINA9Q86WD7 417 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms