RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 CCDC153Q494R4 210 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 RPUSD3Q6P087 351 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 LINC00696Q6ZRV3 163 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 RIPOR1Q6ZS17 1223 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 PIWIL4Q7Z3Z4 852 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 CCDC91Q7Z6B0 441 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 GALNT7Q86SF2 657 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 NUDCD3Q8IVD9 361 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 C2CD4AQ8NCU7 369 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 THAP11Q96EK4 314 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 CNDP1Q96KN2 507 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 C5orf34Q96MH7 638 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 PRAP1Q96NZ9 151 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 FAM111AQ96PZ2 611 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 MESP1Q9BRJ9 268 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 IARS2Q9NSE4 1012 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 ABCF3Q9NUQ8 709 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 RIC8BQ9NVN3 520 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 TAS2R13Q9NYV9 303 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 SLC17A7Q9P2U7 560 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 ERRFI1Q9UJM3 462 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 USH1CQ9Y6N9 552 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 SCN3AQ9NY46 2000 aa11.8□□□□□ -0.52
TRAPPC9-206ENST00000519482 SVILO95425 2214 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 LOC102723996A0A087X1L8 192 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 SLC16A5O15375 505 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 P2RX6O15547 441 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 DCTN3O75935 186 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 BMP10O95393 424 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 BPGMP07738 259 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 CYC1P08574 325 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 ICAM2P13598 275 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 EDN3P14138 238 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 CCND1P24385 295 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 GRK2P25098 689 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 CRABP2P29373 138 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 SOX11P35716 441 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 PRKAA2P54646 552 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 TBPL1P62380 186 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 SP140Q13342 867 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 SETDB1Q15047 1291 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 TMEM205Q6UW68 189 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 PLD3Q8IV08 490 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 ZC3H7AQ8IWR0 971 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 MYO1HQ8N1T3 1032 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 EEF1AKMT1Q8WVE0 214 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 FAR1Q8WVX9 515 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 SREK1Q8WXA9 508 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 PSMF1Q92530 271 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 MCMBPQ9BTE3 642 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 RHOJQ9H4E5 214 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 PARVBQ9HBI1 364 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 MID2Q9UJV3 735 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 PDE10AQ9Y233 779 aa11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 MTO1Q9Y2Z2 717 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-206ENST00000519482 DYTNA2CJ06 578 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 FFAR3O14843 346 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 GPR42O15529 346 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 WFS1O76024 890 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 NSA2O95478 260 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 ALDOAP04075 364 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 HIST1H2AGP0C0S8 130 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 HIST1H2ADP20671 130 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 ARG2P78540 354 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 TIAL1Q01085 375 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 EEF1A2Q05639 463 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 ACTN3Q08043 901 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 BMPR2Q13873 1038 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 SYT16Q17RD7 645 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 AGTRAPQ6RW13 159 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 MAMDC2Q7Z304 686 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 VN1R4Q7Z5H5 301 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 C17orf64Q86WR6 236 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 CCDC63Q8NA47 563 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 CAMKVQ8NCB2 501 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 OR1N1Q8NGS0 311 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 BRIX1Q8TDN6 353 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 GRHL3Q8TE85 626 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 HAS2Q92819 552 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 TM4SF19Q96DZ7 209 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 HIST1H2AHQ96KK5 128 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 C7orf26Q96N11 449 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 NDNQ99608 321 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 HIST1H2AJQ99878 128 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 SIKE1Q9BRV8 207 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 H2AFJQ9BTM1 129 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 ZNF700Q9H0M5 742 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 THAP1Q9NVV9 213 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 PTGFRNQ9P2B2 879 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 ADAMTS6Q9UKP5 1117 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 MKL2Q9ULH7 1088 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 MRPS2Q9Y399 296 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 ITPR2Q14571 2701 aa11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 DIDO1Q9BTC0 2240 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-206ENST00000519482 TRAV17A0A0B4J275 112 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 WDR91A4D1P6 747 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 E2F3O00716 465 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 AHSGP02765 367 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 C8orf89P0DMQ9 161 aa11.77□□□□□ -0.53
TRAPPC9-206ENST00000519482 GABRB3P28472 473 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms