RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 IL10P22301 178 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 ARL1P40616 181 aaPredicted RBP20.79■□□□□ 0.92
VEGFA-217ENST00000518538 PIK3CBP42338 1070 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 RRADP55042 308 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 ZNF844Q08AG5 666 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 TRAF3Q13114 568 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 RBBP7Q16576 425 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 SOWAHCQ53LP3 525 aaPredicted RBP20.79■□□□□ 0.92
VEGFA-217ENST00000518538 ZNF678Q5SXM1 525 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 CPZQ66K79 652 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 TRIM40Q6P9F5 258 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 ZYG11AQ6WRX3 759 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 EXD3Q8N9H8 876 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 OR5T3Q8NGG3 340 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 CCDC126Q96EE4 140 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 FAR2Q96K12 515 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 CDK15Q96Q40 435 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 TMEM237Q96Q45 408 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 OR1F2PQ96R84 312 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 MS4A8Q9BY19 250 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 ING2Q9H160 280 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 TUBD1Q9UJT1 453 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 PCSK5Q92824 1860 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 A0A088AWK7 358 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 G3V2L1 256 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 AGPSO00116 658 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 SOCS6O14544 535 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 OTCP00480 354 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 HEXBP07686 556 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 CYC1P08574 325 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 MYL2P10916 166 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 IMPDH1P20839 514 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 ZNF10P21506 573 aaPredicted RBP20.78■□□□□ 0.92
VEGFA-217ENST00000518538 EMP2P54851 167 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 BTN3A2P78410 334 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 PHEXP78562 749 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 TGM3Q08188 693 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 KCNAB2Q13303 367 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 LY6DQ14210 128 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 CPSF6Q16630 551 aaKnown RBP eCLIP20.78■□□□□ 0.92
VEGFA-217ENST00000518538 UNC50Q53HI1 259 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 RPS27LQ71UM5 84 aaKnown RBP20.78■□□□□ 0.92
VEGFA-217ENST00000518538 SRRM1Q8IYB3 904 aaKnown RBP20.78■□□□□ 0.92
VEGFA-217ENST00000518538 SHISA5Q8N114 240 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 HUS1BQ8NHY5 278 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 RDH11Q8TC12 318 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 PPP4R1Q8TF05 950 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 SLC39A7Q92504 469 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 L3HYPDHQ96EM0 354 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 APOPT1Q96IL0 206 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 VPS50Q96JG6 964 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 MAGEB10Q96LZ2 347 aaPredicted RBP20.78■□□□□ 0.92
VEGFA-217ENST00000518538 FER1L6-AS2Q96M78 137 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 PRM3Q9NNZ6 103 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 ACSS2Q9NR19 701 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 MKL2Q9ULH7 1088 aa20.78■□□□□ 0.92
VEGFA-217ENST00000518538 CCDC151A5D8V7 595 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 PCDH17O14917 1159 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 CHST10O43529 356 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 JRKO75564 520 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 SUPT7LO94864 414 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 SFTPCP11686 197 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 PLA2G16P53816 162 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 CDH13P55290 713 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 OLR1P78380 273 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 CLCQ05315 142 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 ZRSR2Q15696 482 aaKnown RBP20.77■□□□□ 0.92
VEGFA-217ENST00000518538 KRT71Q3SY84 523 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 GGTA1PQ4G0N0 100 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 TMEM35AQ53FP2 167 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 DCAF10Q5QP82 559 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 ABHD17CQ6PCB6 329 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 KIRREL2Q6UWL6 708 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 IQCKQ8N0W5 287 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 BANPQ8N9N5 519 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 SRFBP1Q8NEF9 429 aaKnown RBP20.77■□□□□ 0.92
VEGFA-217ENST00000518538 CMTM7Q96FZ5 175 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 PEX11GQ96HA9 241 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 QRFPRQ96P65 431 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 F2RL3Q96RI0 385 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 TRIM55Q9BYV6 548 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 DMRT3Q9NQL9 472 aa20.77■□□□□ 0.92
VEGFA-217ENST00000518538 A0A0G2JN53 185 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 DNAJB6O75190 326 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 DNAJB5O75953 348 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 TGFB1P01137 390 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 CHAF1BQ13112 559 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 DDX39BQ13838 428 aaKnown RBP20.76■□□□□ 0.91
VEGFA-217ENST00000518538 CHSY3Q70JA7 882 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 MILR1Q7Z6M3 343 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 CCDC63Q8NA47 563 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 OR4F6Q8NGB9 312 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 WDR20Q8TBZ3 569 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 TRPC4APQ8TEL6 797 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 TBC1D20Q96BZ9 403 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 KCNC2Q96PR1 638 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 MTERF1Q99551 399 aaKnown RBP20.76■□□□□ 0.91
VEGFA-217ENST00000518538 NPLQ9BXD5 320 aaPredicted RBP20.76■□□□□ 0.91
VEGFA-217ENST00000518538 VN1R1Q9GZP7 353 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 IQCGQ9H095 443 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms