RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 PFDN4Q9NQP4 134 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 THSD1Q9NS62 852 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 NDOR1Q9UHB4 597 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 PPT2Q9UMR5 302 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 CDC14AQ9UNH5 594 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 SLC22A7Q9Y694 548 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 SPEGQ15772 3267 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 SPTBN4Q9H254 2564 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 SCN3AQ9NY46 2000 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 A0A088AWK7 358 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 A0A1B0GX78 115 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 SERTM1A2A2V5 107 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 LRIT2A6NDA9 550 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 CDRT15L2A8MXV6 281 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 TMEM229AB2RXF0 380 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 BRINP1O60477 761 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 STK17BO94768 372 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 KLK3P07288 261 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-205ENST00000518196 ZNF888P0CJ79 500 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-205ENST00000518196 ZNF10P21506 573 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-205ENST00000518196 AGXTP21549 392 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 SERPINB3P29508 390 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 ARRB2P32121 409 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 RPL14P50914 215 aaKnown RBP12.34□□□□□ -0.43
PABPC1-205ENST00000518196 RAP1GDS1P52306 607 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 SHC2P98077 582 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 CSTF3Q12996 717 aaKnown RBP12.34□□□□□ -0.43
PABPC1-205ENST00000518196 CUL3Q13618 768 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 FAM53BQ14153 422 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 IMPG1Q17R60 797 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 ADPRMQ3LIE5 342 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 TCHHL1Q5QJ38 904 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-205ENST00000518196 DEPDC1Q5TB30 811 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 ADNP2Q6IQ32 1131 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 TMEM214Q6NUQ4 689 aaKnown RBP12.34□□□□□ -0.43
PABPC1-205ENST00000518196 TRIM40Q6P9F5 258 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 C6orf15Q6UXA7 325 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-205ENST00000518196 CRLF3Q8IUI8 442 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 RNF175Q8N4F7 328 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 ZNF781Q8N8C0 355 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 PROKR1Q8TCW9 393 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 AGR3Q8TD06 166 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 UTP15Q8TED0 518 aaKnown RBP12.34□□□□□ -0.43
PABPC1-205ENST00000518196 GAL3ST3Q96A11 431 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 RGMAQ96B86 450 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 MS4A6EQ96DS6 147 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 MVB12AQ96EY5 273 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 C10orf90Q96M02 699 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 ZNF578Q96N58 590 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-205ENST00000518196 LRFN5Q96NI6 719 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 F2RL3Q96RI0 385 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 SORT1Q99523 831 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 C20orf27Q9GZN8 174 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 OR51B5Q9H339 312 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 KLHL31Q9H511 634 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 ANKHQ9HCJ1 492 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 ASCL3Q9NQ33 180 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 FARSBQ9NSD9 589 aaKnown RBP12.34□□□□□ -0.43
PABPC1-205ENST00000518196 AHSPQ9NZD4 102 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 FOXJ2Q9P0K8 574 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 DHCR7Q9UBM7 475 aaKnown RBP12.34□□□□□ -0.43
PABPC1-205ENST00000518196 HAO1Q9UJM8 370 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 ANGPTL2Q9UKU9 493 aa12.34□□□□□ -0.43
PABPC1-205ENST00000518196 TMEM184BQ9Y519 407 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-205ENST00000518196 SEC16AO15027 2179 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 SLC28A1O00337 649 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 ERI3O43414 337 aaKnown RBP12.33□□□□□ -0.44
PABPC1-205ENST00000518196 SH3BGRLO75368 114 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 PIM1P11309 404 aaPredicted RBP12.33□□□□□ -0.44
PABPC1-205ENST00000518196 ZNF28P17035 718 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 ALOX12P18054 663 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 HNRNPH1P31943 449 aaKnown RBP12.33□□□□□ -0.44
PABPC1-205ENST00000518196 AVPR1BP47901 424 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 HTR6P50406 440 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 ARFIP1P53367 373 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 OCRLQ01968 901 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 ABHD18Q0P651 414 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 HYAL2Q12891 473 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 ABRAXAS2Q15018 415 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 AP5B1Q2VPB7 878 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 KHDRBS2Q5VWX1 349 aaKnown RBP12.33□□□□□ -0.44
PABPC1-205ENST00000518196 PRMT9Q6P2P2 845 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 SCIMPQ6UWF3 145 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 ATG14Q6ZNE5 492 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 RGS9BPQ6ZS82 235 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 DDIASQ8IXT1 998 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 OR2L5Q8NG80 312 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 TWIST2Q8WVJ9 160 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 CCT7Q99832 543 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 DPH2Q9BQC3 489 aaPredicted RBP12.33□□□□□ -0.44
PABPC1-205ENST00000518196 TBCDQ9BTW9 1192 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 ROGDIQ9GZN7 287 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 SLC12A4Q9UP95 1085 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 DNAJC15Q9Y5T4 150 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 DCHS1Q96JQ0 3298 aa12.33□□□□□ -0.44
PABPC1-205ENST00000518196 TMEM233B4DJY2 109 aa12.32□□□□□ -0.44
PABPC1-205ENST00000518196 SLCO1B7G3V0H7 640 aa12.32□□□□□ -0.44
PABPC1-205ENST00000518196 STMND1H3BQB6 276 aa12.32□□□□□ -0.44
PABPC1-205ENST00000518196 MEN1O00255 615 aa12.32□□□□□ -0.44
PABPC1-205ENST00000518196 RGS14O43566 566 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms