RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 EEFSECP57772 596 aaKnown RBP7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PHC1P78364 1004 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 BNC1Q01954 994 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 KLC1Q07866 573 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 LRRC74AQ0VAA2 488 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 HYAL2Q12891 473 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 BNIP3Q12983 259 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 FLOT2Q14254 428 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TRIM25Q14258 630 aaKnown RBP7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 DUOXA1Q1HG43 343 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ZNF528Q3MIS6 628 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 LRIF1Q5T3J3 769 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PEAR1Q5VY43 1037 aaPredicted RBP7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ANKRD26P1Q6NSI1 321 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 NANOGP8Q6NSW7 305 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 IRGCQ6NXR0 463 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 FBXO42Q6P3S6 717 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ABHD17CQ6PCB6 329 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 DNAJC14Q6Y2X3 702 aaPredicted RBP7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ZNF438Q7Z4V0 828 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 VN1R4Q7Z5H5 301 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CAMKMTQ7Z624 323 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 UBE3DQ7Z6J8 389 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 RABEPKQ7Z6M1 372 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ANKRD46Q86W74 232 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 KIAA2013Q8IYS2 634 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SLC25A45Q8N413 288 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ARL10Q8N8L6 244 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CAMKVQ8NCB2 501 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 FAM156AQ8NDB6 213 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 VPS37AQ8NEZ2 397 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 OR8J3Q8NGG0 315 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 NT5CQ8TCD5 201 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 RERGQ96A58 199 aaPredicted RBP7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TMEM125Q96AQ2 219 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PPCDCQ96CD2 204 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 COQ8BQ96D53 544 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ANKRD27Q96NW4 1050 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 GBP5Q96PP8 586 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 KCNC2Q96PR1 638 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 OR2A5Q96R48 311 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PANX1Q96RD7 426 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SH3GL1Q99961 368 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ZFYVE21Q9BQ24 234 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TBCDQ9BTW9 1192 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 BHLHE41Q9C0J9 482 aaPredicted RBP7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SLC6A16Q9GZN6 736 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PAIP1Q9H074 479 aaKnown RBP7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 KLHL25Q9H0H3 589 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ABCG4Q9H172 646 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SEMA6CQ9H3T2 930 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 KLHL31Q9H511 634 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 DCLRE1BQ9H816 532 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 DDX31Q9H8H2 851 aaKnown RBP7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 NANOGQ9H9S0 305 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 LHX9Q9NQ69 397 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SERHLQ9NQF3 203 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 MIEF1Q9NQG6 463 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 EVA1BQ9NVM1 165 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ZSCAN32Q9NX65 697 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CMTM6Q9NX76 183 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CD300AQ9UGN4 299 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 BTNL2Q9UIR0 455 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PILRAQ9UKJ1 303 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 EXO1Q9UQ84 846 aaKnown RBP7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 AP3M1Q9Y2T2 418 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PCDHA9Q9Y5H5 950 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PCDH15Q96QU1 1955 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ARID1BQ8NFD5 2236 aaPredicted RBP7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 A0A0A6YYD5 115 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 A0A1B0GTQ1 180 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 PRSS51A0A1B0GVH4 220 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 URADA6NGE7 173 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 H0Y3Z8 333 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 YKT6O15498 198 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 NUDT21O43809 227 aaKnown RBP7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 TBX19O60806 448 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 GPR37L1O60883 481 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 DNAJA2O60884 412 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 GUCY1B2O75343 617 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 FKBP6O75344 327 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 BCAS2O75934 225 aaPredicted RBP7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 KRT36O76013 467 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 KLHL18O94889 574 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 PSMG1O95456 288 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CPSF4O95639 269 aaKnown RBP7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 GSNP06396 782 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ALPPL2P10696 532 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 HIST1H1TP22492 207 aaPredicted RBP7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 EPHA8P29322 1005 aaPredicted RBP7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ALDH9A1P49189 494 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 GSK3BP49841 420 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ERFP50548 548 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 EPHA4P54764 986 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 WNT3P56703 355 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 MTPNP58546 118 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 RAB8AP61006 207 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 PPP1CAP62136 330 aa7.27□□□□□ -1.25
SCARNA20.1-201ENST00000516009 TRA2BP62995 288 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms