RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	ACAD11	Q709F0	780 aa		14.71	□□□□□ -0.05
LMNA-223	ENST00000515459	ABHD13	Q7L211	337 aa		14.71	□□□□□ -0.05
LMNA-223	ENST00000515459	TMEM139	Q8IV31	216 aa		14.71	□□□□□ -0.05
LMNA-223	ENST00000515459	CCDC71	Q8IV32	467 aa	Predicted RBP	14.71	□□□□□ -0.05
LMNA-223	ENST00000515459	LMNTD2	Q8IXW0	634 aa		14.71	□□□□□ -0.05
LMNA-223	ENST00000515459	RPRML	Q8N4K4	120 aa		14.71	□□□□□ -0.05
LMNA-223	ENST00000515459	TBC1D19	Q8N5T2	526 aa		14.71	□□□□□ -0.05
LMNA-223	ENST00000515459	TMEM156	Q8N614	296 aa		14.71	□□□□□ -0.05
LMNA-223	ENST00000515459	ABHD11	Q8NFV4	315 aa		14.71	□□□□□ -0.05
LMNA-223	ENST00000515459	OR52N2	Q8NGI0	321 aa		14.71	□□□□□ -0.05
LMNA-223	ENST00000515459	NRGN	Q92686	78 aa		14.71	□□□□□ -0.05
LMNA-223	ENST00000515459	SEC16B	Q96JE7	1060 aa		14.71	□□□□□ -0.05
LMNA-223	ENST00000515459	HAUS8	Q9BT25	410 aa		14.71	□□□□□ -0.05
LMNA-223	ENST00000515459	TRMT6	Q9UJA5	497 aa	Known RBP	14.71	□□□□□ -0.05
LMNA-223	ENST00000515459	IGKV3D-11	A0A0A0MRZ8	115 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	TRBC2	A0A5B9	178 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459		A8MUA0	341 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	ITGA10	O75578	1167 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	B3GALT4	O96024	378 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	ZNF888	P0CJ79	500 aa	Predicted RBP	14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	RGS4	P49798	205 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	CLCN2	P51788	898 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	SP140	Q13342	867 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	EMC4	Q5J8M3	183 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	UGT3A1	Q6NUS8	523 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	MDGA2	Q7Z553	956 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	CAND1	Q86VP6	1230 aa	Known RBP	14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	CLYBL	Q8N0X4	340 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	CHDH	Q8NE62	594 aa	Predicted RBP	14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	ARMC2	Q8NEN0	867 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	OR4K1	Q8NGD4	311 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	CALML6	Q8TD86	181 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	EEF1AKMT1	Q8WVE0	214 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	MAIP1	Q8WWC4	291 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	FOXC2	Q99958	501 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	CLK4	Q9HAZ1	481 aa	Known RBP	14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	TIMMDC1	Q9NPL8	285 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	PRDM9	Q9NQV7	894 aa		14.7	□□□□□ -0.06
LMNA-223	ENST00000515459	TRBV11-1	A0A0K0K1C0	115 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	ZCWPW2	A0A1B0GU75	182 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	SDR42E2	A6NKP2	422 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	PSMD12	O00232	456 aa	Predicted RBP	14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	SLC16A5	O15375	505 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	KLK8	O60259	260 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	HAUS5	O94927	633 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	TUBB4A	P04350	444 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	HOXB4	P17483	251 aa	Predicted RBP	14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	HIST1H2AD	P20671	130 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	MAGEA6	P43360	314 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	NUP107	P57740	925 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	KCTD19	Q17RG1	926 aa	Predicted RBP	14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	KIAA0408	Q6ZU52	694 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	STRA8	Q7Z7C7	330 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	TGIF2LY	Q8IUE0	185 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	APCDD1L	Q8NCL9	501 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	B3GNT7	Q8NFL0	401 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	OR5M3	Q8NGP4	307 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	NT5C	Q8TCD5	201 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	UTP15	Q8TED0	518 aa	Known RBP	14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	NINJ1	Q92982	152 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	PYCR2	Q96C36	320 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	SNF8	Q96H20	258 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	HIST1H2AH	Q96KK5	128 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	HIST1H2AJ	Q99878	128 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	AARSD1	Q9BTE6	412 aa	Known RBP	14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	H2AFJ	Q9BTM1	129 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	DEFB127	Q9H1M4	99 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	CXXC4	Q9H2H0	198 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	NECTIN3	Q9NQS3	549 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	C20orf96	Q9NUD7	363 aa	Predicted RBP	14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	ZFP69B	Q9UJL9	534 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	FBXO5	Q9UKT4	447 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	FBXW2	Q9UKT8	454 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	GUCA1B	Q9UMX6	200 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	ZNF407	Q9C0G0	2248 aa		14.69	□□□□□ -0.06
LMNA-223	ENST00000515459	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	NPIPA2	E9PIF3	369 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	NPIPA3	F8WFD2	350 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	ACOT7	O00154	380 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	FGG	P02679	453 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	MLN	P12872	115 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	RNH1	P13489	461 aa	Known RBP	14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	VPS41	P49754	854 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	SSR4	P51571	173 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	FOLH1	Q04609	750 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	DHX9	Q08211	1270 aa	Known RBP	14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	HYAL2	Q12891	473 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	GPS1	Q13098	491 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	TERF2	Q15554	542 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	TRIP13	Q15645	432 aa	Predicted RBP	14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	PHKG1	Q16816	387 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	GXYLT1	Q4G148	440 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	DUPD1	Q68J44	220 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	MYO1H	Q8N1T3	1032 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	PSD4	Q8NDX1	1056 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	SLC6A16	Q9GZN6	736 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	KCMF1	Q9P0J7	381 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	ZFAT	Q9P243	1243 aa		14.68	□□□□□ -0.06
LMNA-223	ENST00000515459	ERVK-11	Q9UQG0	969 aa		14.68	□□□□□ -0.06

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