RNA–Protein interactions for RNA: ENST00000515064.5

LDB2-216, Transcript of LIM domain binding 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LDB2, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-216ENST00000515064 RNF215Q9Y6U7 377 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 CCL15-CCL14A0A0B4J2E2 113 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 LCHNA4D1U4 455 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 DBX1A6NMT0 343 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 KPNA3O00505 521 aaPredicted RBP6.92□□□□□ -1.3
LDB2-216ENST00000515064 ADAM12O43184 909 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 ATG12O94817 140 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 AP2A2O94973 939 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 CDRT1O95170 752 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 IL6P05231 212 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 MYCLP12524 364 aaPredicted RBP6.92□□□□□ -1.3
LDB2-216ENST00000515064 PRF1P14222 555 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 FPR1P21462 350 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 APEX1P27695 318 aaKnown RBP6.92□□□□□ -1.3
LDB2-216ENST00000515064 LCN1P31025 176 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 HOXA9P31269 272 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 DNAJA1P31689 397 aaKnown RBP6.92□□□□□ -1.3
LDB2-216ENST00000515064 SDC2P34741 201 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 ATP5C1P36542 298 aaKnown RBP6.92□□□□□ -1.3
LDB2-216ENST00000515064 TKTL1P51854 596 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 NUBP1P53384 320 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 VSX2P58304 361 aaPredicted RBP6.92□□□□□ -1.3
LDB2-216ENST00000515064 TCP10Q12799 353 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 PRKG2Q13237 762 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 CTBP1Q13363 440 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 CAMK2GQ13555 558 aaPredicted RBP6.92□□□□□ -1.3
LDB2-216ENST00000515064 PUM1Q14671 1186 aaKnown RBP eCLIP6.92□□□□□ -1.3
LDB2-216ENST00000515064 PTPRCAPQ14761 206 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 CCL15Q16663 113 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 SUPT20HL1Q3ZLR7 823 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 SPDYE7PQ495Y7 208 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 C4orf46Q504U0 113 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 NCBP2-AS2Q69YL0 99 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 C19orf48Q6RUI8 117 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 FAM198BQ6UWH4 519 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 SUSD1Q6UWL2 747 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 B3GNT9Q6UX72 402 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 HSDL2Q6YN16 418 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 GDPGP1Q6ZNW5 385 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 CEP68Q76N32 757 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 RHOUQ7L0Q8 258 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 ZFAND4Q86XD8 727 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 MIB1Q86YT6 1006 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 PSTKQ8IV42 348 aaKnown RBP6.92□□□□□ -1.3
LDB2-216ENST00000515064 MCATQ8IVS2 390 aaKnown RBP6.92□□□□□ -1.3
LDB2-216ENST00000515064 MFSD6LQ8IWD5 586 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 FAM217AQ8IXS0 508 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 ADGRF3Q8IZF5 1079 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 ZNF567Q8N184 647 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 DPP10Q8N608 796 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 TMEM145Q8NBT3 493 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 ZNF548Q8NEK5 533 aaPredicted RBP6.92□□□□□ -1.3
LDB2-216ENST00000515064 OR10A6Q8NH74 314 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 CREB3L4Q8TEY5 395 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 BSNDQ8WZ55 320 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 EXT2Q93063 718 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 SLC25A46Q96AG3 418 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 EXOSC8Q96B26 276 aaKnown RBP6.92□□□□□ -1.3
LDB2-216ENST00000515064 L3HYPDHQ96EM0 354 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 C11orf24Q96F05 449 aaPredicted RBP6.92□□□□□ -1.3
LDB2-216ENST00000515064 KIF12Q96FN5 646 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 SCRN2Q96FV2 425 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 TMEM68Q96MH6 324 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 ZNF583Q96ND8 569 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 CSPG4P5Q96PW8 444 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 OR5M11Q96RB7 305 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 H2AFJQ9BTM1 129 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 CRB3Q9BUF7 120 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 ERVK-6Q9BXR3 956 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 XYLT2Q9H1B5 865 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 CASS4Q9NQ75 786 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 DCAF13Q9NV06 445 aaKnown RBP6.92□□□□□ -1.3
LDB2-216ENST00000515064 ZIM2Q9NZV7 527 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 MALT1Q9UDY8 824 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 PTCH2Q9Y6C5 1203 aa6.92□□□□□ -1.3
LDB2-216ENST00000515064 A0A1B0GW55 424 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 A0A1B0GWJ7 208 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 POM121CA8CG34 1229 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 EFCAB7A8K855 629 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 H0YCG3 227 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 SULT1C2O00338 296 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 CLN5O75503 358 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 POP7O75817 140 aaKnown RBP6.91□□□□□ -1.3
LDB2-216ENST00000515064 POP4O95707 220 aaKnown RBP6.91□□□□□ -1.3
LDB2-216ENST00000515064 VIPP01282 170 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 NMBP08949 121 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 H2AFB1P0C5Y9 115 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 H2AFB2P0C5Z0 115 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 DUX4L2P0CJ85 424 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 DUX4L3P0CJ86 424 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 DUX4L4P0CJ87 422 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 DUX4L5P0CJ88 424 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 DUX4L6P0CJ89 424 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 DUX4L7P0CJ90 424 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 NCF1P14598 390 aaPredicted RBP6.91□□□□□ -1.3
LDB2-216ENST00000515064 TPH1P17752 444 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 RHCEP18577 417 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 SP3Q02447 781 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 PWP1Q13610 501 aa6.91□□□□□ -1.3
LDB2-216ENST00000515064 IL18Q14116 193 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms