RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 SLC39A12Q504Y0 691 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 AGAP6Q5VW22 663 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 SLC27A4Q6P1M0 643 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 TMEM270Q6UE05 265 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 CHMP1BQ7LBR1 199 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 SLC22A15Q8IZD6 547 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 AP2M1Q96CW1 435 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 CDKN2AIPNLQ96HQ2 116 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 EPSTI1Q96J88 318 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 IL12RB2Q99665 862 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 IDI2Q9BXS1 227 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 FGFBP2Q9BYJ0 223 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 FNDC4Q9H6D8 234 aaPredicted RBP4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 MTHFD2LQ9H903 347 aaPredicted RBP4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 ZDHHC18Q9NUE0 388 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 PLCL2Q9UPR0 1127 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 WIPI2Q9Y4P8 454 aa4.33□□□□□ -1.72
HMGCS1-207ENST00000514610 hCG_38984A0A1B0GV85 526 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 SERINC4A6NH21 518 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 LMO7DNF2Z398 122 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 SIGLEC5O15389 551 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 RAD51DO75771 328 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 LETM1O95202 739 aaPredicted RBP4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 GOSR1O95249 250 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 ZNF883P0CG24 379 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 VCLP18206 1134 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 C4BPBP20851 252 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 GJB2P29033 226 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 LUMP51884 338 aaPredicted RBP4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 ERVK11-1P61568 191 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 NECTIN1Q15223 517 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 MAPK11Q15759 364 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 MACC1Q6ZN28 852 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 CCDC91Q7Z6B0 441 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 ZER1Q7Z7L7 766 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 ASPGQ86U10 573 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 CCDC185Q8N715 623 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 AQP11Q8NBQ7 271 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 RPLP0P6Q8NHW5 317 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 MOCOSQ96EN8 888 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 LINC00479Q96M42 142 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 PCDHB18PQ96TA0 734 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 WWTR1Q9GZV5 400 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 RNPEPL1Q9HAU8 725 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 LNPEPQ9UIQ6 1025 aa4.32□□□□□ -1.72
HMGCS1-207ENST00000514610 C13orf42A0A1B0GVH6 325 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 MAGEB16A2A368 324 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 CCDC162PA2VCL2 907 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 GTPBP10A4D1E9 387 aaKnown RBP4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 LRRD1A4D1F6 860 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 NKX6-3A6NJ46 265 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 K7EQD1 137 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 CRCPO75575 148 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 GAS8-AS1O95177 125 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 CTNNA2P26232 953 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 PDHA2P29803 388 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 KHKP50053 298 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 CLCN4P51793 760 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 NME5P56597 212 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 HUNKP57058 714 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 CALCOCO2Q13137 446 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 GPR50Q13585 617 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 FASTKD1Q53R41 847 aaKnown RBP4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 LRRC38Q5VT99 294 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 PRAMEF8Q5VWM4 474 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 TCEAL6Q6IPX3 200 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 ZNF613Q6PF04 617 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 Q6ZVQ6 151 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 SNX32Q86XE0 403 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 TMEM99Q8N816 258 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 NUP37Q8NFH4 326 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 ATP8B4Q8TF62 1192 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 CHURC1Q8WUH1 139 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 SEPT8Q92599 483 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 SLC35C1Q96A29 364 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 BPIFA2Q96DR5 249 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 C18orf12Q96KH6 178 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 ZNF599Q96NL3 588 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 THEGQ9P2T0 379 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 KIAA1217Q5T5P2 1943 aa4.31□□□□□ -1.72
HMGCS1-207ENST00000514610 IGHV3-20A0A0C4DH32 117 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 A0A1W2PRV1 198 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 ANHXE9PGG2 379 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 NXPH4O95158 308 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 FEN1P39748 380 aaKnown RBP4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 HNF4AP41235 474 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 SLC1A3P43003 542 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 SERPINH1P50454 418 aaKnown RBP4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 DHODHQ02127 395 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 CNTN1Q12860 1018 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 ACKR1Q16570 336 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 MOGAT2Q3SYC2 334 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 ZNF776Q68DI1 518 aaPredicted RBP4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 ZNF713Q8N859 430 aaPredicted RBP4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 SPATA3Q8NHX4 192 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 SMPDL3AQ92484 453 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 BCL2L2Q92843 193 aaPredicted RBP4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 FAM46BQ96A09 425 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 ATXN7L3BQ96GX2 97 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 MCRIP2Q9BUT9 160 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms