RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	OR6J1	Q8NGC5	347 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	STRADB	Q9C0K7	418 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	HEG1	Q9ULI3	1381 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	ZNF646	O15015	1829 aa	Predicted RBP	3.19	□□□□□ -1.9
MATR3-223	ENST00000514402		A0A1W2PNU3	283 aa	Predicted RBP	3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	BCLAF3	A2AJT9	711 aa	Known RBP	3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	ANXA2P2	A6NMY6	339 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	P4HA2	O15460	535 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	PLOD3	O60568	738 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	LRCH4	O75427	683 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	RPN1	P04843	607 aa	Known RBP	3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	GOT1	P17174	413 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	FEN1	P39748	380 aa	Known RBP	3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	PPP5C	P53041	499 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	RAD23A	P54725	363 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	ZRANB3	Q5FWF4	1079 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	KRBOX4	Q5JUW0	171 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	C9orf66	Q5T8R8	295 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	RSBN1	Q5VWQ0	802 aa	Predicted RBP	3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	C15orf52	Q6ZUT6	534 aa	Known RBP	3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	ADCK2	Q7Z695	626 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	C11orf53	Q8IXP5	236 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	LSMEM1	Q8N8F7	131 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	TYMSOS	Q8TAI1	123 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	MRPS27	Q92552	414 aa	Known RBP	3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	RAD54L	Q92698	747 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	PCDHB18P	Q96TA0	734 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	NAA11	Q9BSU3	229 aa	Predicted RBP	3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	CCDC28B	Q9BUN5	200 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	AP1M1	Q9BXS5	423 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	UBQLN3	Q9H347	655 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	FNDC4	Q9H6D8	234 aa	Predicted RBP	3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	RPF1	Q9H9Y2	349 aa	Known RBP	3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	SH3GLB2	Q9NR46	395 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	PHPT1	Q9NRX4	125 aa	Predicted RBP	3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	UBQLN2	Q9UHD9	624 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	AUP1	Q9Y679	476 aa		3.19	□□□□□ -1.9
MATR3-223	ENST00000514402	TXNL1	O43396	289 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	KIF5C	O60282	957 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	ZNF354A	O60765	605 aa	Predicted RBP	3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	PRAF2	O60831	178 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	PRDM1	O75626	825 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	PENK	P01210	267 aa	Predicted RBP	3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	GLUL	P15104	373 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	CTNNA2	P26232	953 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	KHK	P50053	298 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	NAGLU	P54802	743 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	ACY1	Q03154	408 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	TNK1	Q13470	666 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	ZNF273	Q14593	569 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	SIX1	Q15475	284 aa	Predicted RBP	3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	TAZ	Q16635	292 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	TCEAL6	Q6IPX3	200 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	RPUSD3	Q6P087	351 aa	Known RBP	3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	MOXD1	Q6UVY6	613 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	PPP1R21	Q6ZMI0	780 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402		Q6ZVQ6	151 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	TRMT11	Q7Z4G4	463 aa	Known RBP	3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	TIGD4	Q8IY51	512 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	IQUB	Q8NA54	791 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	NCOA7	Q8NI08	942 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	UBAC1	Q9BSL1	405 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	ALKBH7	Q9BT30	221 aa	Predicted RBP	3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	KATNB1	Q9BVA0	655 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	NACAP1	Q9BZK3	213 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	ZCCHC17	Q9NP64	241 aa	Known RBP	3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	IL1RAP	Q9NPH3	570 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	CLEC5A	Q9NY25	188 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	C5AR2	Q9P296	337 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	SATB2	Q9UPW6	733 aa		3.18	□□□□□ -1.9
MATR3-223	ENST00000514402	CROCC	Q5TZA2	2017 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	IGHV3-16	A0A0C4DH30	117 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	TSPY2	A6NKD2	308 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402		H3BMM5	538 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402		K7EQG2	157 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	RTCA	O00442	366 aa	Known RBP	3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	PHF1	O43189	567 aa	Predicted RBP	3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	PGLS	O95336	258 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	MOCS2	O96007	188 aa	Predicted RBP	3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	MT-ND2	P03891	347 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	DUX4L4	P0CJ87	422 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	TCF4	P15884	667 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	ELK3	P41970	407 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	RPL34	P49207	117 aa	Known RBP	3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	GMPS	P49915	693 aa	Predicted RBP	3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	CDO1	Q16878	200 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	PIGW	Q7Z7B1	504 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	NKAIN3	Q8N8D7	197 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	AGAP11	Q8TF27	550 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	ZNF414	Q96IQ9	312 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	CYYR1	Q96J86	154 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	TAAR6	Q96RI8	345 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	LRRCC1	Q9C099	1032 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	MARCH7	Q9H992	704 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	MRGBP	Q9NV56	204 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	PLCL2	Q9UPR0	1127 aa		3.17	□□□□□ -1.9
MATR3-223	ENST00000514402	TRGV8	A0A0C4DH27	118 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	GLTPD2	A6NH11	291 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	SIGLEC5	O15389	551 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	FLRT2	O43155	660 aa		3.16	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms