RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 KLHL38Q2WGJ6 581 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 PCID2Q5JVF3 399 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 CCDC137Q6PK04 289 aaKnown RBP13□□□□□ -0.33
SPCS3-204ENST00000513139 PDSS2Q86YH6 399 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 KLHL7Q8IXQ5 586 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 LRRC56Q8IYG6 542 aaPredicted RBP13□□□□□ -0.33
SPCS3-204ENST00000513139 PPFIBP2Q8ND30 876 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 OR52N2Q8NGI0 321 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 TSLPQ969D9 159 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 PEX11GQ96HA9 241 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 GPATCH1Q9BRR8 931 aaKnown RBP13□□□□□ -0.33
SPCS3-204ENST00000513139 SARGQ9BW04 601 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 ETNK1Q9HBU6 452 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 CHRAC1Q9NRG0 131 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 TREX1Q9NSU2 369 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 RNF14Q9UBS8 474 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 TSR3Q9UJK0 312 aaKnown RBP13□□□□□ -0.33
SPCS3-204ENST00000513139 PLEKHA6Q9Y2H5 1048 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 FEZF1A0PJY2 475 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 FIGNL2A6NMB9 653 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 ESPNB1AK53 854 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 E7EVH7 732 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 NIPSNAP2O75323 286 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 RDH16O75452 317 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 CDC123O75794 336 aaPredicted RBP12.99□□□□□ -0.33
SPCS3-204ENST00000513139 PDE9AO76083 593 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 STATHP02808 62 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 ESR1P03372 595 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 FHP07954 510 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 JAK1P23458 1154 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 HERC3Q15034 1050 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 SLC25A35Q3KQZ1 300 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 GXYLT1Q4G148 440 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 RNF187Q5TA31 235 aaPredicted RBP12.99□□□□□ -0.33
SPCS3-204ENST00000513139 THEMIS2Q5TEJ8 643 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 KIAA0408Q6ZU52 694 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 SDCCAG8Q86SQ7 713 aaPredicted RBP12.99□□□□□ -0.33
SPCS3-204ENST00000513139 ZZZ3Q8IYH5 903 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 CYP4Z2PQ8N1L4 340 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 CCDC89Q8N998 374 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 OR10Q1Q8NGQ4 319 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 GOT1L1Q8NHS2 421 aaPredicted RBP12.99□□□□□ -0.33
SPCS3-204ENST00000513139 KIF18AQ8NI77 898 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 LPGAT1Q92604 370 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 TBC1D20Q96BZ9 403 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 C18orf12Q96KH6 178 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 TCF12Q99081 682 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 TTYH2Q9BSA4 534 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 NAALAD2Q9Y3Q0 740 aa12.99□□□□□ -0.33
SPCS3-204ENST00000513139 ATRQ13535 2644 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 SAGE2PA6NJ88 616 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 BCKDKO14874 412 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 PFDN6O15212 129 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 FMO4P31512 558 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 SKIV2L2P42285 1042 aaKnown RBP12.98□□□□□ -0.33
SPCS3-204ENST00000513139 KIR2DL3P43628 341 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 VPS41P49754 854 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 TERF1P54274 439 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 SKP1P63208 163 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 MRPS25P82663 173 aaKnown RBP12.98□□□□□ -0.33
SPCS3-204ENST00000513139 TYSND1Q2T9J0 566 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 ACSBG2Q5FVE4 666 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 MRNIPQ6NTE8 343 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 NIPAL1Q6NVV3 410 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 B3GNT6Q6ZMB0 384 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 RGS9BPQ6ZS82 235 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 CDC20BQ86Y33 519 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 KCT2Q8NC54 265 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 NFAM1Q8NET5 270 aaPredicted RBP12.98□□□□□ -0.33
SPCS3-204ENST00000513139 SPATA4Q8NEY3 305 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 ZCCHC10Q8TBK6 192 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 CREB3L4Q8TEY5 395 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 ARSGQ96EG1 525 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 MACROD1Q9BQ69 325 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 DEFB126Q9BYW3 111 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 PCBD2Q9H0N5 130 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 ZDHHC11Q9H8X9 412 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 ZANQ9Y493 2812 aa12.98□□□□□ -0.33
SPCS3-204ENST00000513139 STAB1Q9NY15 2570 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 A0A0G2JNJ9 132 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 FAM47E-STBD1D6RA91 191 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 NPIPA2E9PIF3 369 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 NPIPA3F8WFD2 350 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 GFYI3L273 518 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 ZNF500O60304 480 aaPredicted RBP12.97□□□□□ -0.33
SPCS3-204ENST00000513139 KRT14P02533 472 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 SLC35G6P0C7Q6 338 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 GLI4P10075 376 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 CHRM3P20309 590 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 FNTAP49354 379 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 C2orf54Q08AI8 447 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 KCNJ11Q14654 390 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 PAMR1Q6UXH9 720 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 QSOX2Q6ZRP7 698 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 MDGA2Q7Z553 956 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 ASPGQ86U10 573 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 SLC26A11Q86WA9 606 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 AFAP1L2Q8N4X5 818 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 TMEM156Q8N614 296 aa12.97□□□□□ -0.33
SPCS3-204ENST00000513139 SLC13A3Q8WWT9 602 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms