RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 RHBDL2Q9NX52 303 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 VWA7Q9Y334 891 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 BTNL10A8MVZ5 291 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 RCBTB2O95199 551 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 ZIC2O95409 532 aaPredicted RBP8.64□□□□□ -1.03
VCAN-208ENST00000512590 SEC24AO95486 1093 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 TGM6O95932 706 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 CSF2RAP15509 400 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 DRD1P21728 446 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 VEGFBP49765 207 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 CLCN2P51788 898 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 IL10RAQ13651 578 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 NFE2L1Q14494 772 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 AADACL2Q6P093 401 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 PAMR1Q6UXH9 720 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 SPATA19Q7Z5L4 167 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 UEVLDQ8IX04 471 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 CMIPQ8IY22 773 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 PRR22Q8IZ63 422 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 RSC1A1Q92681 617 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 ZFRQ96KR1 1074 aaKnown RBP8.64□□□□□ -1.03
VCAN-208ENST00000512590 ZNF570Q96NI8 536 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 SNRNP25Q9BV90 132 aaKnown RBP8.64□□□□□ -1.03
VCAN-208ENST00000512590 MCOLN1Q9GZU1 580 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 FAM86C1Q9NVL1 165 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 TBCCD1Q9NVR7 557 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 MRPS2Q9Y399 296 aaKnown RBP8.64□□□□□ -1.03
VCAN-208ENST00000512590 CNTNAP5Q8WYK1 1306 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 SLC16A5O15375 505 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 GRIA3P42263 894 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 RHDQ02161 417 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 TRIM61Q5EBN2 209 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 DACT2Q5SW24 774 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 BMFQ96LC9 184 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 MYRFLQ96LU7 910 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 GPR21Q99679 349 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 ACBD6Q9BR61 282 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 PCDHGA2Q9Y5H1 932 aa8.64□□□□□ -1.03
VCAN-208ENST00000512590 FUOMA2VDF0 154 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 MPZL2O60487 215 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 S1PR1P21453 382 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 GLDCP23378 1020 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 PTAFRP25105 342 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 ICAM3P32942 547 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 BMP8BP34820 402 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 BMI1P35226 326 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 RORAP35398 523 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 YAP1P46937 504 aaKnown RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 HABP2Q14520 560 aaPredicted RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 REP15Q6BDI9 236 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 CEACAM20Q6UY09 585 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 BBS12Q6ZW61 710 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 BMP8AQ7Z5Y6 402 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 NDRG1Q92597 394 aaKnown RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 NSMAFQ92636 917 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 SPTSSAQ969W0 71 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 TRIM43Q96BQ3 446 aaPredicted RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 RSPRY1Q96DX4 576 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 SENP5Q96HI0 755 aaPredicted RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 RBM24Q9BX46 236 aaKnown RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 RTFDC1Q9BY42 306 aaPredicted RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 PECRQ9BY49 303 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 FBRSQ9HAH7 460 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 OXSMQ9NWU1 459 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 PDP2Q9P2J9 529 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 GNG8Q9UK08 70 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 NOP16Q9Y3C1 178 aaKnown RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 COMMD3-BMI1R4GMX3 469 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 A0A1W2PRB8 838 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 EFCAB9A8MZ26 197 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 LEFTY2O00292 366 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 CHEK1O14757 476 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 PCDH7O60245 1069 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 FOXD2O60548 495 aaPredicted RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 FKBP6O75344 327 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 CLPXO76031 633 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 UBOX5O94941 541 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 IGFBP1P08833 259 aaPredicted RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 C8orf89P0DMQ9 161 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 ICAM2P13598 275 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 HK1P19367 917 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 GSTT1P30711 240 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 DLSTP36957 453 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 GRIA4P48058 902 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 EMP2P54851 167 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 HHEXQ03014 270 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 CBLBQ13191 982 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 ZACNQ401N2 412 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 LRRC37A5PQ49AS3 106 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 TXNDC8Q6A555 127 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 DRICH1Q6PGQ1 229 aaPredicted RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 KCTD9Q7L273 389 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 TMCO2Q7Z6W1 182 aaPredicted RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 BPHLQ86WA6 291 aaPredicted RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 TICAM1Q8IUC6 712 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 BANPQ8N9N5 519 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 BHLHE22Q8NFJ8 381 aaPredicted RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 CASTOR1Q8WTX7 329 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 SEC14L1Q92503 715 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 SYN2Q92777 582 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms