RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 TRMT1Q9NXH9 659 aaKnown RBP13.79□□□□□ -0.2
CCHCR1-229ENST00000512418 PSAT1Q9Y617 370 aa13.79□□□□□ -0.2
CCHCR1-229ENST00000512418 IGKV3D-11A0A0A0MRZ8 115 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 TCRBV16S1A1N1A0A5B0 115 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 CTAGE15A4D2H0 777 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 NPEPPSL1A6NEC2 478 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 NPIPA5E9PKD4 350 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 SLC25A12O75746 678 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 SEC31AO94979 1220 aaKnown RBP13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 SERPINA6P08185 405 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 SMIM10L1P0DMW3 83 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 ESRRAP11474 423 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 MAOAP21397 527 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 SAT1P21673 171 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 GRNP28799 593 aaKnown RBP13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 TPP2P29144 1249 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 HNF4AP41235 474 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 ITGA8P53708 1063 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 RAB8AP61006 207 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 BTG2P78543 158 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 MGAT5Q09328 741 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 HYAL2Q12891 473 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 RBBP5Q15291 538 aaKnown RBP13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 C3AR1Q16581 482 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 SLC25A25Q6KCM7 469 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 XKRXQ6PP77 449 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 Q6ZPB1 254 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 ADAMTSL2Q86TH1 951 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 CTAGE6Q86UF2 777 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 SPPL2CQ8IUH8 684 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 MCEMP1Q8IX19 187 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 CYP4X1Q8N118 509 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 SMIM10Q96HG1 83 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 EGFL8Q99944 293 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 TSPAN10Q9H1Z9 355 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 PRDM9Q9NQV7 894 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 TINAGQ9UJW2 476 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 NPIPA1Q9UND3 350 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 ZNF835Q9Y2P0 537 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 OARD1Q9Y530 152 aa13.78□□□□□ -0.2
CCHCR1-229ENST00000512418 APCP25054 2843 aa13.77□□□□□ -0.2
CCHCR1-229ENST00000512418 FAM95CA0A1B0GW59 222 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 GNAZP19086 355 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 AGAP20933 346 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 HTR1EP28566 365 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 PTGER4P35408 488 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 CYB561P49447 251 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 ZNF460Q14592 562 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 MAPKAPK3Q16644 382 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 ZNF630Q2M218 657 aaPredicted RBP13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 TOR1AIP1Q5JTV8 583 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 ZNF468Q5VIY5 522 aaPredicted RBP13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 FRA10AC1Q70Z53 315 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 ANKMY2Q8IV38 441 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 SIAH3Q8IW03 269 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 ARMC2Q8NEN0 867 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 TTLQ8NG68 377 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 CREB3L4Q8TEY5 395 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 VPS39Q96JC1 886 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 CAPZA3Q96KX2 299 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 TRIM51Q9BSJ1 452 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 KLHL31Q9H511 634 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 TRIM45Q9H8W5 580 aaPredicted RBP13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 NSMCE4AQ9NXX6 385 aa13.77□□□□□ -0.21
CCHCR1-229ENST00000512418 C4orf51C9J302 202 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 FCHO1O14526 889 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 ASNA1O43681 348 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 NME2P1O60361 137 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 WDR47O94967 919 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 ZNF24P17028 368 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 NME2P22392 152 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 GSTM2P28161 218 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 TRHRP34981 398 aaPredicted RBP13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 SMSP52788 366 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 MLF1P58340 268 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 TAS2R39P59534 338 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 STXBP1P61764 594 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 ADORA2A-AS1P86434 159 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 ILF2Q12905 390 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 PDIA2Q13087 525 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 FASTKD3Q14CZ7 662 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 TSNQ15631 228 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 CREG2Q8IUH2 290 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 KLHDC8AQ8IYD2 350 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 CA13Q8N1Q1 262 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 ARMC10Q8N2F6 343 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 GHDCQ8N2G8 530 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 FBXO36Q8NEA4 188 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 NFAM1Q8NET5 270 aaPredicted RBP13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 ANKRD49Q8WVL7 239 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 GAL3ST3Q96A11 431 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 TMEM125Q96AQ2 219 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 RHBGQ9H310 441 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 KCNF1Q9H3M0 494 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 RHOJQ9H4E5 214 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 POPDC3Q9HBV1 291 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 GPAMQ9HCL2 828 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 NECTIN3Q9NQS3 549 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms