RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 SLC28A2O43868 658 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 B4GALT2O60909 372 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 CLEC3AO75596 197 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 WFS1O76024 890 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 TBX6O95947 436 aaPredicted RBP13.19□□□□□ -0.3
DDX41-212ENST00000511040 SBK3P0C264 359 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 COX6A1P12074 109 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 ARL1P40616 181 aaPredicted RBP13.19□□□□□ -0.3
DDX41-212ENST00000511040 CASP2P42575 452 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 PLA2G16P53816 162 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 Q0VFX4 171 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 AIMP2Q13155 320 aaKnown RBP13.19□□□□□ -0.3
DDX41-212ENST00000511040 DDX39BQ13838 428 aaKnown RBP13.19□□□□□ -0.3
DDX41-212ENST00000511040 PCBP2Q15366 365 aaKnown RBP eCLIP13.19□□□□□ -0.3
DDX41-212ENST00000511040 MED27Q6P2C8 311 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 RPS27LQ71UM5 84 aaKnown RBP13.19□□□□□ -0.3
DDX41-212ENST00000511040 ZNF605Q86T29 641 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 CYP4X1Q8N118 509 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 RNF175Q8N4F7 328 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 OR2W6PQ8NHA6 318 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 MZB1Q8WU39 189 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 GAL3ST3Q96A11 431 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 NACC2Q96BF6 587 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 FAR2Q96K12 515 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 NSUN5Q96P11 429 aaKnown RBP13.19□□□□□ -0.3
DDX41-212ENST00000511040 F2RL3Q96RI0 385 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 MRPL46Q9H2W6 279 aaKnown RBP13.19□□□□□ -0.3
DDX41-212ENST00000511040 IPPKQ9H8X2 491 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 ACTR8Q9H981 624 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 MLXIPLQ9NP71 852 aa13.19□□□□□ -0.3
DDX41-212ENST00000511040 RRAGDQ9NQL2 400 aaPredicted RBP13.19□□□□□ -0.3
DDX41-212ENST00000511040 G3BP2Q9UN86 482 aaKnown RBP13.19□□□□□ -0.3
DDX41-212ENST00000511040 PCDHGA9Q9Y5G4 932 aaKnown RBP13.19□□□□□ -0.3
DDX41-212ENST00000511040 TNPO3Q9Y5L0 923 aaKnown RBP13.19□□□□□ -0.3
DDX41-212ENST00000511040 NSG1A0A0A6YYJ2 146 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 HPP00738 406 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 CELA2AP08217 269 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 C8orf89P0DMQ9 161 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 SKP1P63208 163 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 MYBPC3Q14896 1274 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 ERCC6LQ2NKX8 1250 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 GRHL2Q6ISB3 625 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 TMEM151AQ8N4L1 468 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 OR7G3Q8NG95 312 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 METTL21AQ8WXB1 218 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.18□□□□□ -0.3
DDX41-212ENST00000511040 TSLPQ969D9 159 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 TBC1D20Q96BZ9 403 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 VPS50Q96JG6 964 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 CDK15Q96Q40 435 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 MFRPQ9BY79 579 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 TRIM4Q9C037 500 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 REXO4Q9GZR2 422 aaKnown RBP13.18□□□□□ -0.3
DDX41-212ENST00000511040 NOL11Q9H8H0 719 aaKnown RBP13.18□□□□□ -0.3
DDX41-212ENST00000511040 LANCL2Q9NS86 450 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 TMCO1Q9UM00 188 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 RNF11Q9Y3C5 154 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 ZNF451Q9Y4E5 1061 aa13.18□□□□□ -0.3
DDX41-212ENST00000511040 IGHV1-45A0A0A0MS14 117 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 A8MT66 165 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 STX16-NPEPL1H3BU86 382 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 SAP18O00422 153 aaKnown RBP13.17□□□□□ -0.3
DDX41-212ENST00000511040 OR7A17O14581 309 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 STX16O14662 325 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 SUV39H1O43463 412 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 SEC24DO94855 1032 aaPredicted RBP13.17□□□□□ -0.3
DDX41-212ENST00000511040 TGFB1P01137 390 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 FHP07954 510 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 PLA2G2AP14555 144 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 KRT15P19012 456 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 TSPAN8P19075 237 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 CERS1P27544 350 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 GSTM2P28161 218 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 PIK3CGP48736 1102 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 RHAGQ02094 409 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 PCDH1Q08174 1060 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 RUNX2Q13950 521 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 E2F2Q14209 437 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 ABRAXAS2Q15018 415 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 PCOLCEQ15113 449 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 CPSF6Q16630 551 aaKnown RBP eCLIP13.17□□□□□ -0.3
DDX41-212ENST00000511040 NADK2Q4G0N4 442 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 VWA5B1Q5TIE3 1220 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 FAM219BQ5XKK7 198 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 TRIM40Q6P9F5 258 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 TMEM205Q6UW68 189 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 NDUFAF7Q7L592 441 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 LAS2Q8IYD9 372 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 CA13Q8N1Q1 262 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 TEX19Q8NA77 164 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 OR2L5Q8NG80 312 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 OR52B6Q8NGF0 335 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 HUS1BQ8NHY5 278 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 AENQ8WTP8 325 aaKnown RBP13.17□□□□□ -0.3
DDX41-212ENST00000511040 ZNF473Q8WTR7 871 aaKnown RBP13.17□□□□□ -0.3
DDX41-212ENST00000511040 UBE2E3Q969T4 207 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 ATP6V1E2Q96A05 226 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 THOC3Q96J01 351 aaKnown RBP13.17□□□□□ -0.3
DDX41-212ENST00000511040 SEC16BQ96JE7 1060 aa13.17□□□□□ -0.3
DDX41-212ENST00000511040 QRFPRQ96P65 431 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms