RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 NFE2L1Q14494 772 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 C8orf82Q6P1X6 216 aaPredicted RBP14.34□□□□□ -0.11
USP38-202ENST00000510377 RFLNAQ6ZTI6 216 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 DNAJB7Q7Z6W7 309 aaPredicted RBP14.34□□□□□ -0.11
USP38-202ENST00000510377 OR2AP1Q8NGE2 309 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 OR8H1Q8NGG4 311 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 CRELD1Q96HD1 420 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 RIOK2Q9BVS4 552 aaKnown RBP14.34□□□□□ -0.11
USP38-202ENST00000510377 MRPL9Q9BYD2 267 aaKnown RBP14.34□□□□□ -0.11
USP38-202ENST00000510377 SLC22A4Q9H015 551 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 ACTL8Q9H568 366 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 ZNF840PA6NDX5 716 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 GRXCR2A6NFK2 248 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 PRLP01236 227 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 PTHP01270 115 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 ELFN1P0C7U0 828 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 CSTF2P33240 577 aaKnown RBP eCLIP14.34□□□□□ -0.11
USP38-202ENST00000510377 PNCKQ6P2M8 343 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 CEACAM20Q6UY09 585 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 ASB18Q6ZVZ8 466 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 ARMCX6Q7L4S7 300 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 MRPL10Q7Z7H8 261 aaKnown RBP14.34□□□□□ -0.11
USP38-202ENST00000510377 GEMIN6Q8WXD5 167 aaKnown RBP14.34□□□□□ -0.11
USP38-202ENST00000510377 GGHQ92820 318 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 ARMC5Q96C12 935 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 AP2M1Q96CW1 435 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 CCDC115Q96NT0 180 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 DOK1Q99704 481 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 ING3Q9NXR8 418 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 NUFIP1Q9UHK0 495 aaKnown RBP14.34□□□□□ -0.11
USP38-202ENST00000510377 SLCO3A1Q9UIG8 710 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 UNCXA6NJT0 531 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 J3KTA2 159 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 CAPNS1P04632 268 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 ATP1B2P14415 290 aaPredicted RBP14.34□□□□□ -0.11
USP38-202ENST00000510377 GTF2IRD2BQ6EKJ0 949 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 GTF2IRD2Q86UP8 949 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 C9orf43Q8TAL5 461 aaPredicted RBP14.34□□□□□ -0.11
USP38-202ENST00000510377 SCLYQ96I15 445 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 CEP295NLQ96MC4 621 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 TLR9Q9NR96 1032 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 IFT52Q9Y366 437 aa14.34□□□□□ -0.11
USP38-202ENST00000510377 SLC30A4O14863 429 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 SLC16A6O15403 523 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 ACLYP53396 1101 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 ARPC4P59998 168 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 SNRPD2P62316 118 aaKnown RBP14.33□□□□□ -0.12
USP38-202ENST00000510377 ARF5P84085 180 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 LCN1P1Q5VSP4 162 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 C22orf42Q6IC83 251 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 GPR26Q8NDV2 337 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 B3GNT7Q8NFL0 401 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 TEX47Q8TBZ9 253 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 MAPRE3Q9UPY8 281 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 HSPE1-MOB4S4R3N1 261 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 SOBPA7XYQ1 873 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 E7EQ34 232 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 ATG13O75143 517 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 TSPAN12O95859 305 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 PTTG1O95997 202 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 DDX5P17844 614 aaKnown RBP14.33□□□□□ -0.12
USP38-202ENST00000510377 CCT3P49368 545 aaKnown RBP14.33□□□□□ -0.12
USP38-202ENST00000510377 HNMTP50135 292 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 MAPK12P53778 367 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 KLHL12Q53G59 568 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 AFMIDQ63HM1 303 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 ERAP2Q6P179 960 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 SLC16A12Q6ZSM3 486 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 NRARPQ7Z6K4 114 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 FOXJ1Q92949 421 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 TEFMQ96QE5 360 aaKnown RBP14.33□□□□□ -0.12
USP38-202ENST00000510377 UCKL1Q9NWZ5 548 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 AREL1O15033 823 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 CASP3P42574 277 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 GPR1P46091 355 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 ACVR1Q04771 509 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 TPRG1Q6ZUI0 275 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 ENTHD1Q8IYW4 607 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 UXS1Q8NBZ7 420 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 MS4A4AQ96JQ5 239 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 ZNF607Q96SK3 696 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 ANKRA2Q9H9E1 313 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 ANKHQ9HCJ1 492 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 AKIP1Q9NQ31 210 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 ADAM30Q9UKF2 790 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 YIPF1Q9Y548 306 aa14.33□□□□□ -0.12
USP38-202ENST00000510377 ZNF831Q5JPB2 1677 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 UPK1AO00322 258 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 BTN3A3O00478 584 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 KLKB1P03952 638 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 POLR2EP19388 210 aaKnown RBP14.32□□□□□ -0.12
USP38-202ENST00000510377 CCR7P32248 378 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 RGS6P49758 472 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 DSTNP60981 165 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 RAB14P61106 215 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 MC1RQ01726 317 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 SYT6Q5T7P8 510 aaPredicted RBP14.32□□□□□ -0.12
USP38-202ENST00000510377 CDH24Q86UP0 819 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 SUN5Q8TC36 379 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 AP3S1Q92572 193 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms