RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PLPP1O14494 284 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 GOSR2O14653 212 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SGCEO43556 437 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 STX10O60499 249 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 CABYRO75952 493 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 CCNB2O95067 398 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SLC25A27O95847 323 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 PLA2G4BP0C869 781 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 UBCP0CG48 685 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TCN1P20061 433 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 BTF3P20290 206 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 MAGP20916 626 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 VIPR2P41587 438 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 GAMTQ14353 236 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 HKDC1Q2TB90 917 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 CCDC153Q494R4 210 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SAPCD1Q5SSQ6 148 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM63BQ5T3F8 832 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 VWA5B1Q5TIE3 1220 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SLC25A25Q6KCM7 469 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 BAIAP2L2Q6UXY1 529 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 UEVLDQ8IX04 471 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SLC35F2Q8IXU6 374 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ZFP82Q8N141 532 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 FITM2Q8N6M3 262 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 PHF21AQ96BD5 680 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 PGAM5Q96HS1 289 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF285Q96NJ3 590 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 UTP23Q9BRU9 249 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 NDC1Q9BTX1 674 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM185BQ9H7F4 350 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 MARCH7Q9H992 704 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SCPEP1Q9HB40 452 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ELL3Q9HB65 397 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 EQTNQ9NQ60 294 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ZC3H7BQ9UGR2 993 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 OSGIN1Q9UJX0 560 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 MRTO4Q9UKD2 239 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 NUMBLQ9Y6R0 609 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 A0A1W2PPV4 95 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 FAM149AA5PLN7 773 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 OR6C68A6NDL8 312 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SRRM3A6NNA2 597 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TLR4O00206 839 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TRIAP1O43715 76 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 MYO1DO94832 1006 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ITGA5P08648 1049 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ZCCHC18P0CG32 403 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 GYPEP15421 78 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TNFRSF1AP19438 455 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SDHBP21912 280 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ADRA1DP25100 572 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 PON1P27169 355 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 YWHAQP27348 245 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SLC19A1P41440 591 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 HAAOP46952 286 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SNTA1Q13424 505 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 CHI3L2Q15782 390 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 UBE2SQ16763 222 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 POM121L1PQ3SYA9 428 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 KHDRBS2Q5VWX1 349 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TTC23Q5W5X9 447 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ULK3Q6PHR2 472 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF546Q86UE3 836 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 HAPLN4Q86UW8 402 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 GPR137CQ8N3F9 429 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 OR14K1Q8NGZ2 314 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 FAM172AQ8WUF8 416 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TSEN15Q8WW01 171 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 LENG9Q96B70 501 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 KLRG1Q96E93 195 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 CCDC126Q96EE4 140 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SLC30A3Q99726 388 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 C17orf62Q9BQA9 187 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM246Q9BRR3 403 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SPATC1LQ9H0A9 340 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SLC6A20Q9NP91 592 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 OLFML3Q9NRN5 406 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 DECR2Q9NUI1 292 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 PANK4Q9NVE7 773 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ZDHHC8Q9ULC8 765 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TTC7AQ9ULT0 858 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 FZD10Q9ULW2 581 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 GMPPBQ9Y5P6 360 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 IRAK3Q9Y616 596 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TRAV6A0A075B6T7 132 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 POTEMA6NI47 508 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 A6NNC1 897 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TCP11X1B4DZS4 312 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 E5RI56 91 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 LCMT2O60294 686 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 FOXD2O60548 495 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 NOL4O94818 638 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SPP1P10451 314 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 PRPS1P60891 318 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 EEF1A1P68104 462 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 JAG1P78504 1218 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 CCZ1BP86790 482 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 CCZ1P86791 482 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF45Q02386 682 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms