RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 C1QTNF12Q5T7M4 302 aa5.68□□□□□ -1.5
CHD1-205ENST00000508756 CDHR3Q6ZTQ4 885 aa5.68□□□□□ -1.5
CHD1-205ENST00000508756 PHLDB2Q86SQ0 1253 aa5.68□□□□□ -1.5
CHD1-205ENST00000508756 OR5M9Q8NGP3 310 aa5.68□□□□□ -1.5
CHD1-205ENST00000508756 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.68□□□□□ -1.5
CHD1-205ENST00000508756 ZNF597Q96LX8 424 aa5.68□□□□□ -1.5
CHD1-205ENST00000508756 TUBB1Q9H4B7 451 aa5.68□□□□□ -1.5
CHD1-205ENST00000508756 ZCCHC17Q9NP64 241 aaKnown RBP5.68□□□□□ -1.5
CHD1-205ENST00000508756 GMEB2Q9UKD1 530 aa5.68□□□□□ -1.5
CHD1-205ENST00000508756 PILRAQ9UKJ1 303 aa5.68□□□□□ -1.5
CHD1-205ENST00000508756 TP53BP1Q12888 1972 aaPredicted RBP5.67□□□□□ -1.5
CHD1-205ENST00000508756 IGLV4-3A0A075B6K6 122 aa5.67□□□□□ -1.5
CHD1-205ENST00000508756 TBCAO75347 108 aaKnown RBP5.67□□□□□ -1.5
CHD1-205ENST00000508756 OR3A3P47888 321 aa5.67□□□□□ -1.5
CHD1-205ENST00000508756 FKBP3Q00688 224 aaKnown RBP5.67□□□□□ -1.5
CHD1-205ENST00000508756 FOLH1Q04609 750 aa5.67□□□□□ -1.5
CHD1-205ENST00000508756 MPP7Q5T2T1 576 aa5.67□□□□□ -1.5
CHD1-205ENST00000508756 POM121L12Q8N7R1 296 aa5.67□□□□□ -1.5
CHD1-205ENST00000508756 FOXN4Q96NZ1 517 aa5.67□□□□□ -1.5
CHD1-205ENST00000508756 CHCHD5Q9BSY4 110 aa5.67□□□□□ -1.5
CHD1-205ENST00000508756 PAPOLGQ9BWT3 736 aaKnown RBP5.67□□□□□ -1.5
CHD1-205ENST00000508756 NACAP1Q9BZK3 213 aa5.67□□□□□ -1.5
CHD1-205ENST00000508756 IL1RAPQ9NPH3 570 aa5.67□□□□□ -1.5
CHD1-205ENST00000508756 MRPS18CQ9Y3D5 142 aaKnown RBP5.67□□□□□ -1.5
CHD1-205ENST00000508756 ACOD1A6NK06 481 aa5.66□□□□□ -1.5
CHD1-205ENST00000508756 RNF103O00237 685 aa5.66□□□□□ -1.5
CHD1-205ENST00000508756 TRAFD1O14545 582 aaPredicted RBP5.66□□□□□ -1.5
CHD1-205ENST00000508756 MTRF1O75570 445 aaKnown RBP5.66□□□□□ -1.5
CHD1-205ENST00000508756 RLN1P04808 185 aa5.66□□□□□ -1.5
CHD1-205ENST00000508756 CTNNA2P26232 953 aa5.66□□□□□ -1.5
CHD1-205ENST00000508756 FEN1P39748 380 aaKnown RBP5.66□□□□□ -1.5
CHD1-205ENST00000508756 PGFP49763 221 aa5.66□□□□□ -1.5
CHD1-205ENST00000508756 ERVK-16P61578 105 aa5.66□□□□□ -1.5
CHD1-205ENST00000508756 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.66□□□□□ -1.5
CHD1-205ENST00000508756 ZNF774Q6NX45 483 aa5.66□□□□□ -1.5
CHD1-205ENST00000508756 PET117Q6UWS5 81 aa5.66□□□□□ -1.5
CHD1-205ENST00000508756 C15orf52Q6ZUT6 534 aaKnown RBP5.66□□□□□ -1.5
CHD1-205ENST00000508756 GLRX5Q86SX6 157 aa5.66□□□□□ -1.5
CHD1-205ENST00000508756 CDC20BQ86Y33 519 aa5.66□□□□□ -1.5
CHD1-205ENST00000508756 TDHQ8IZJ6 230 aa5.66□□□□□ -1.5
CHD1-205ENST00000508756 CORO2AQ92828 525 aa5.66□□□□□ -1.5
CHD1-205ENST00000508756 PCDHB18PQ96TA0 734 aa5.66□□□□□ -1.5
CHD1-205ENST00000508756 HEXA-AS1Q9H8Q6 139 aa5.66□□□□□ -1.5
CHD1-205ENST00000508756 HBS1LQ9Y450 684 aaKnown RBP5.66□□□□□ -1.5
CHD1-205ENST00000508756 PCDHGA1Q9Y5H4 931 aa5.66□□□□□ -1.5
CHD1-205ENST00000508756 A0A0B4J203 849 aa5.65□□□□□ -1.5
CHD1-205ENST00000508756 SRRM5B3KS81 715 aa5.65□□□□□ -1.5
CHD1-205ENST00000508756 ST8SIA3O43173 380 aa5.65□□□□□ -1.5
CHD1-205ENST00000508756 ACSL4O60488 711 aa5.65□□□□□ -1.5
CHD1-205ENST00000508756 PKLRP30613 574 aa5.65□□□□□ -1.5
CHD1-205ENST00000508756 FCHO2Q0JRZ9 810 aa5.65□□□□□ -1.5
CHD1-205ENST00000508756 PPA1Q15181 289 aa5.65□□□□□ -1.5
CHD1-205ENST00000508756 UPP1Q16831 310 aa5.65□□□□□ -1.5
CHD1-205ENST00000508756 ZNF841Q6ZN19 808 aa5.65□□□□□ -1.5
CHD1-205ENST00000508756 Q6ZVQ6 151 aa5.65□□□□□ -1.5
CHD1-205ENST00000508756 SPPL2AQ8TCT8 520 aa5.65□□□□□ -1.5
CHD1-205ENST00000508756 SSC4DQ8WTU2 575 aa5.65□□□□□ -1.5
CHD1-205ENST00000508756 DNASE1L2Q92874 299 aa5.65□□□□□ -1.5
CHD1-205ENST00000508756 SGF29Q96ES7 293 aa5.65□□□□□ -1.5
CHD1-205ENST00000508756 ERO1AQ96HE7 468 aa5.65□□□□□ -1.5
CHD1-205ENST00000508756 FNDC4Q9H6D8 234 aaPredicted RBP5.65□□□□□ -1.5
CHD1-205ENST00000508756 PDRG1Q9NUG6 133 aa5.65□□□□□ -1.5
CHD1-205ENST00000508756 DBF4Q9UBU7 674 aaPredicted RBP5.65□□□□□ -1.5
CHD1-205ENST00000508756 IQCMA0A1B0GVH7 501 aa5.64□□□□□ -1.51
CHD1-205ENST00000508756 SHISA9B4DS77 424 aa5.64□□□□□ -1.51
CHD1-205ENST00000508756 ZNF732B4DXR9 585 aa5.64□□□□□ -1.51
CHD1-205ENST00000508756 LMO7DNF2Z398 122 aa5.64□□□□□ -1.51
CHD1-205ENST00000508756 ZNF749O43361 778 aa5.64□□□□□ -1.51
CHD1-205ENST00000508756 HOXD4P09016 255 aaPredicted RBP5.64□□□□□ -1.51
CHD1-205ENST00000508756 PCP11498 1178 aaKnown RBP5.64□□□□□ -1.51
CHD1-205ENST00000508756 SCG2P13521 617 aa5.64□□□□□ -1.51
CHD1-205ENST00000508756 PIK3R1P27986 724 aa5.64□□□□□ -1.51
CHD1-205ENST00000508756 SRD5A2P31213 254 aa5.64□□□□□ -1.51
CHD1-205ENST00000508756 ATP4BP51164 291 aa5.64□□□□□ -1.51
CHD1-205ENST00000508756 NDUFV3P56181 108 aaKnown RBP5.64□□□□□ -1.51
CHD1-205ENST00000508756 TWISTNBQ3B726 338 aaPredicted RBP5.64□□□□□ -1.51
CHD1-205ENST00000508756 Q71RC1 249 aaPredicted RBP5.64□□□□□ -1.51
CHD1-205ENST00000508756 CD99L2Q8TCZ2 262 aa5.64□□□□□ -1.51
CHD1-205ENST00000508756 PUS3Q9BZE2 481 aaKnown RBP5.64□□□□□ -1.51
CHD1-205ENST00000508756 MRGBPQ9NV56 204 aa5.64□□□□□ -1.51
CHD1-205ENST00000508756 ITGA11Q9UKX5 1188 aa5.64□□□□□ -1.51
CHD1-205ENST00000508756 A8MU76 341 aa5.63□□□□□ -1.51
CHD1-205ENST00000508756 TNFSF12O43508 249 aa5.63□□□□□ -1.51
CHD1-205ENST00000508756 IL4RP24394 825 aa5.63□□□□□ -1.51
CHD1-205ENST00000508756 COPB2P35606 906 aa5.63□□□□□ -1.51
CHD1-205ENST00000508756 KCNJ1P48048 391 aa5.63□□□□□ -1.51
CHD1-205ENST00000508756 ABCE1P61221 599 aaKnown RBP5.63□□□□□ -1.51
CHD1-205ENST00000508756 SCN1BQ07699 218 aa5.63□□□□□ -1.51
CHD1-205ENST00000508756 MAPK11Q15759 364 aa5.63□□□□□ -1.51
CHD1-205ENST00000508756 MLF2Q15773 248 aaPredicted RBP5.63□□□□□ -1.51
CHD1-205ENST00000508756 TCEAL6Q6IPX3 200 aa5.63□□□□□ -1.51
CHD1-205ENST00000508756 C17orf107Q6ZR85 190 aa5.63□□□□□ -1.51
CHD1-205ENST00000508756 TIPARPQ7Z3E1 657 aaKnown RBP5.63□□□□□ -1.51
CHD1-205ENST00000508756 RNF130Q86XS8 419 aa5.63□□□□□ -1.51
CHD1-205ENST00000508756 OR4N5Q8IXE1 308 aa5.63□□□□□ -1.51
CHD1-205ENST00000508756 SIX6OS1Q8N1H7 587 aa5.63□□□□□ -1.51
CHD1-205ENST00000508756 UXS1Q8NBZ7 420 aa5.63□□□□□ -1.51
CHD1-205ENST00000508756 SAP25Q8TEE9 199 aa5.63□□□□□ -1.51
CHD1-205ENST00000508756 DEPDC1BQ8WUY9 529 aa5.63□□□□□ -1.51
CHD1-205ENST00000508756 MR1Q95460 341 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms