RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 GABPB2Q8TAK5 448 aaPredicted RBP16.78■□□□□ 0.28
SKP2-204ENST00000508514 ATL1Q8WXF7 558 aa16.78■□□□□ 0.28
SKP2-204ENST00000508514 TRIM51Q9BSJ1 452 aa16.78■□□□□ 0.28
SKP2-204ENST00000508514 MCMBPQ9BTE3 642 aa16.78■□□□□ 0.28
SKP2-204ENST00000508514 TRIM54Q9BYV2 358 aa16.78■□□□□ 0.28
SKP2-204ENST00000508514 TRIM45Q9H8W5 580 aaPredicted RBP16.78■□□□□ 0.28
SKP2-204ENST00000508514 MOCS1Q9NZB8 636 aa16.78■□□□□ 0.28
SKP2-204ENST00000508514 LRFN1Q9P244 771 aa16.78■□□□□ 0.28
SKP2-204ENST00000508514 SUCOQ9UBS9 1254 aaKnown RBP16.78■□□□□ 0.28
SKP2-204ENST00000508514 CORO1CQ9ULV4 474 aaPredicted RBP16.78■□□□□ 0.28
SKP2-204ENST00000508514 NPIPA1Q9UND3 350 aa16.78■□□□□ 0.28
SKP2-204ENST00000508514 CLDN16Q9Y5I7 305 aa16.78■□□□□ 0.28
SKP2-204ENST00000508514 DCHS2Q6V1P9 2916 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 NPEPPSL1A6NEC2 478 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 PRMT3O60678 531 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 CD46P15529 392 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 EEF1DP29692 281 aaKnown RBP16.77■□□□□ 0.28
SKP2-204ENST00000508514 GDF5P43026 501 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 ITGA8P53708 1063 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 MLF1P58340 268 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 TAS2R39P59534 338 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 HSF1Q00613 529 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 ALDH6A1Q02252 535 aaKnown RBP16.77■□□□□ 0.28
SKP2-204ENST00000508514 OC90Q02509 493 aaPredicted RBP16.77■□□□□ 0.28
SKP2-204ENST00000508514 RGS1Q08116 209 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 KRTCAP3Q53RY4 240 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 CEP97Q8IW35 865 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 KLHL7Q8IXQ5 586 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 CYP4X1Q8N118 509 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 PDIK1LQ8N165 341 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 CA13Q8N1Q1 262 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 ARMC10Q8N2F6 343 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 PELI2Q9HAT8 420 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 ZFATQ9P243 1243 aa16.77■□□□□ 0.28
SKP2-204ENST00000508514 NCOA6Q14686 2063 aaPredicted RBP16.76■□□□□ 0.27
SKP2-204ENST00000508514 SAGE2PA6NJ88 616 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 USP27XA6NNY8 438 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 TGFBR3LH3BV60 316 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 C19orf84I3L1E1 186 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 ASNA1O43681 348 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 PRAMEF4O60810 478 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 PIAS1O75925 651 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 TBX6O95947 436 aaPredicted RBP16.76■□□□□ 0.27
SKP2-204ENST00000508514 SAT1P21673 171 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 JAK1P23458 1154 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 RBPJQ06330 500 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 RUNX2Q13950 521 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 RBBP5Q15291 538 aaKnown RBP16.76■□□□□ 0.27
SKP2-204ENST00000508514 PRAMEF9Q5VWM5 478 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 RPTNQ6XPR3 784 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 SLCO4C1Q6ZQN7 724 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 ABHD13Q7L211 337 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 TMPRSS11BQ86T26 416 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 APCDD1LQ8NCL9 501 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 RHBGQ9H310 441 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 SMYD2Q9NRG4 433 aa16.76■□□□□ 0.27
SKP2-204ENST00000508514 ZNF223Q9UK11 482 aaPredicted RBP16.76■□□□□ 0.27
SKP2-204ENST00000508514 A8MUA0 341 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 ADAM10O14672 748 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 NME2P1O60361 137 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 SLC25A12O75746 678 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 SEC31AO94979 1220 aaKnown RBP16.75■□□□□ 0.27
SKP2-204ENST00000508514 WISP3O95389 354 aaPredicted RBP16.75■□□□□ 0.27
SKP2-204ENST00000508514 SERPINA6P08185 405 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 SNRPB2P08579 225 aaKnown RBP16.75■□□□□ 0.27
SKP2-204ENST00000508514 POU3F2P20265 443 aaPredicted RBP16.75■□□□□ 0.27
SKP2-204ENST00000508514 NME2P22392 152 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 TRHRP34981 398 aaPredicted RBP16.75■□□□□ 0.27
SKP2-204ENST00000508514 SLC6A12P48065 614 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 HNRNPFP52597 415 aaKnown RBP16.75■□□□□ 0.27
SKP2-204ENST00000508514 TAS2R50P59544 299 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 CDKL1Q00532 357 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 MGAT5Q09328 741 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 TSNQ15631 228 aaKnown RBP16.75■□□□□ 0.27
SKP2-204ENST00000508514 MAPKAPK3Q16644 382 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 TOR1AIP1Q5JTV8 583 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 MTFR2Q6P444 385 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 XKRXQ6PP77 449 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.75■□□□□ 0.27
SKP2-204ENST00000508514 KLHDC8AQ8IYD2 350 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 ZNF295-AS1Q8N0V1 137 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 CPSF7Q8N684 471 aaKnown RBP16.75■□□□□ 0.27
SKP2-204ENST00000508514 TMEM178AQ8NBL3 297 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 TMEM52Q8NDY8 209 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 TRPV3Q8NET8 790 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 ANKRD7Q92527 254 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 LRRC39Q96DD0 335 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 CAPZA3Q96KX2 299 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 PHF12Q96QT6 1004 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 AIF1LQ9BQI0 150 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 CLK4Q9HAZ1 481 aaKnown RBP16.75■□□□□ 0.27
SKP2-204ENST00000508514 PRDM9Q9NQV7 894 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 MEMO1Q9Y316 297 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 DYRK1BQ9Y463 629 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 OARD1Q9Y530 152 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 ASB1Q9Y576 335 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 KCNE2Q9Y6J6 123 aa16.75■□□□□ 0.27
SKP2-204ENST00000508514 A0A0G2JN53 185 aa16.74■□□□□ 0.27
SKP2-204ENST00000508514 FAM95CA0A1B0GW59 222 aa16.74■□□□□ 0.27
SKP2-204ENST00000508514 RNH1P13489 461 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms