RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 BTKQ06187 659 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 MAD2L1Q13257 205 aaPredicted RBP8.21□□□□□ -1.09
USP46-207ENST00000508499 RTP5Q14D33 572 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 GPR19Q15760 415 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 SNAP47Q5SQN1 464 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 METTL21CQ5VZV1 264 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 ZNF385CQ66K41 422 aaPredicted RBP8.21□□□□□ -1.09
USP46-207ENST00000508499 ADNP2Q6IQ32 1131 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 TRIM40Q6P9F5 258 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 PAGE2Q7Z2X7 111 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 ALYREFQ86V81 257 aaKnown RBP8.21□□□□□ -1.09
USP46-207ENST00000508499 PLD3Q8IV08 490 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 TTC29Q8NA56 475 aaPredicted RBP8.21□□□□□ -1.09
USP46-207ENST00000508499 OR1L3Q8NH93 324 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 UTP15Q8TED0 518 aaKnown RBP8.21□□□□□ -1.09
USP46-207ENST00000508499 RGMAQ96B86 450 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 ZNF764Q96H86 408 aaPredicted RBP8.21□□□□□ -1.09
USP46-207ENST00000508499 PRR11Q96HE9 360 aaPredicted RBP8.21□□□□□ -1.09
USP46-207ENST00000508499 QRFPRQ96P65 431 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 OR6C1Q96RD1 312 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 CCDC28BQ9BUN5 200 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 TRIM55Q9BYV6 548 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 SHCBP1LQ9BZQ2 653 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 AICDAQ9GZX7 198 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 KLHL25Q9H0H3 589 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 EPN3Q9H201 632 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 SYNDIG1Q9H7V2 258 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 KCNK13Q9HB14 408 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 PRDM7Q9NQW5 492 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 FGFR1OP2Q9NVK5 253 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 TMEM45AQ9NWC5 275 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 OCIAD1Q9NX40 245 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 KLHL14Q9P2G3 628 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 RUVBL1Q9Y265 456 aaKnown RBP8.21□□□□□ -1.09
USP46-207ENST00000508499 LOXL2Q9Y4K0 774 aa8.21□□□□□ -1.09
USP46-207ENST00000508499 TMEM184BQ9Y519 407 aaPredicted RBP8.21□□□□□ -1.09
USP46-207ENST00000508499 LOC100996750A0A140TA64 210 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 A0A1W2PNU3 283 aaPredicted RBP8.2□□□□□ -1.1
USP46-207ENST00000508499 HYKKA2RU49 373 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 EFCAB7A8K855 629 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 CDRT15L2A8MXV6 281 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 PLPP1O14494 284 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 SDHDO14521 159 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 DSCR3O14972 297 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 GALR3O60755 368 aaPredicted RBP8.2□□□□□ -1.1
USP46-207ENST00000508499 CPNE3O75131 537 aaKnown RBP8.2□□□□□ -1.1
USP46-207ENST00000508499 ETHE1O95571 254 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 FAM107AO95990 144 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 JUNP05412 331 aaKnown RBP8.2□□□□□ -1.1
USP46-207ENST00000508499 CYC1P08574 325 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 TROVE2P10155 538 aaKnown RBP eCLIP8.2□□□□□ -1.1
USP46-207ENST00000508499 PCNAP12004 261 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 IL10P22301 178 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 SERPINB3P29508 390 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 RORAP35398 523 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 BSGP35613 385 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 NEK2P51955 445 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 VSX2P58304 361 aaPredicted RBP8.2□□□□□ -1.1
USP46-207ENST00000508499 C21orf58P58505 322 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 GNGT1P63211 74 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 EMX2Q04743 252 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 CYP4F3Q08477 520 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 TARDBPQ13148 414 aaKnown RBP eCLIP8.2□□□□□ -1.1
USP46-207ENST00000508499 KCNAB1Q14722 419 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 HKDC1Q2TB90 917 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 TCHHL1Q5QJ38 904 aaPredicted RBP8.2□□□□□ -1.1
USP46-207ENST00000508499 C6orf136Q5SQH8 315 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 DCAF12Q5T6F0 453 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 TMEM164Q5U3C3 297 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 OR4C11Q6IEV9 310 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 MRM1Q6IN84 353 aaKnown RBP8.2□□□□□ -1.1
USP46-207ENST00000508499 CGB2Q6NT52 195 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 FAM47EQ6ZV65 393 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 MAVSQ7Z434 540 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 UBE3DQ7Z6J8 389 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 ZFAND4Q86XD8 727 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 FAM9CQ8IZT9 166 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 KCT2Q8NC54 265 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 C7orf57Q8NEG2 295 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 OR2T11Q8NH01 316 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 CEP70Q8NHQ1 597 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.2□□□□□ -1.1
USP46-207ENST00000508499 ADAMTS18Q8TE60 1221 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 N4BP2L2Q92802 583 aaPredicted RBP8.2□□□□□ -1.1
USP46-207ENST00000508499 C10orf90Q96M02 699 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 C3orf30Q96M34 536 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 SLC46A1Q96NT5 459 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 SERINC2Q96SA4 455 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 KRTAP4-6Q9BYQ5 205 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 NSRP1Q9H0G5 558 aaKnown RBP8.2□□□□□ -1.1
USP46-207ENST00000508499 POLR1BQ9H9Y6 1135 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 LHX9Q9NQ69 397 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 C1orf109Q9NX04 203 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 MCM8Q9UJA3 840 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 CDC14AQ9UNH5 594 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 SDK2Q58EX2 2172 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 SCN3AQ9NY46 2000 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 SEC16AO15027 2179 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 IGLV3-12A0A075B6K2 115 aa8.2□□□□□ -1.1
USP46-207ENST00000508499 A0A0A6YYD5 115 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms