RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 ZNF383Q8NA42 475 aa3.67□□□□□ -1.82
TRAPPC13-209ENST00000508304 CLEC1AQ8NC01 280 aa3.67□□□□□ -1.82
TRAPPC13-209ENST00000508304 CNNM3Q8NE01 707 aa3.67□□□□□ -1.82
TRAPPC13-209ENST00000508304 OR1J1Q8NGS3 322 aa3.67□□□□□ -1.82
TRAPPC13-209ENST00000508304 IRGQQ8WZA9 623 aa3.67□□□□□ -1.82
TRAPPC13-209ENST00000508304 TSACCQ96A04 125 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC13-209ENST00000508304 MAGED4Q96JG8 741 aa3.67□□□□□ -1.82
TRAPPC13-209ENST00000508304 FAM71F1Q96KD3 344 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC13-209ENST00000508304 SYT11Q9BT88 431 aa3.67□□□□□ -1.82
TRAPPC13-209ENST00000508304 S1PR5Q9H228 398 aa3.67□□□□□ -1.82
TRAPPC13-209ENST00000508304 PELI2Q9HAT8 420 aa3.67□□□□□ -1.82
TRAPPC13-209ENST00000508304 PRMT8Q9NR22 394 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC13-209ENST00000508304 ZCCHC3Q9NUD5 404 aaKnown RBP3.67□□□□□ -1.82
TRAPPC13-209ENST00000508304 TMOD3Q9NYL9 352 aa3.67□□□□□ -1.82
TRAPPC13-209ENST00000508304 TAS2R3Q9NYW6 316 aa3.67□□□□□ -1.82
TRAPPC13-209ENST00000508304 WDR83OSQ9Y284 106 aa3.67□□□□□ -1.82
TRAPPC13-209ENST00000508304 KLF2Q9Y5W3 355 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC13-209ENST00000508304 IGLV9-49A0A0B4J1Y8 123 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 CFAP73A6NFT4 308 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 ANKRD61A6NGH8 418 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 GAPDHSO14556 408 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 ZNF197O14709 1029 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 AP2A2O94973 939 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 TRIM16O95361 564 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 CEBPBP17676 345 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 SFNP31947 248 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 SFTPDP35247 375 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 ASMTP46597 345 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 GPC3P51654 580 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 IRX4P78413 519 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 MAT1AQ00266 395 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 CACNG1Q06432 222 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 ARHGAP1Q07960 439 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 PNRC1Q12796 327 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 GPR17Q13304 367 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 TRA2AQ13595 282 aaKnown RBP eCLIP3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 TAF7Q15545 349 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 SNAI3Q3KNW1 292 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 ADAMTSL4-AS1Q5T5F5 129 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 GALNT17Q6IS24 598 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 BHLHB9Q6PI77 547 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 NHLRC1Q6VVB1 395 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 APCDD1Q8J025 514 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 LSMEM2Q8N112 164 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 RAB42Q8N4Z0 105 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 ZNF614Q8N883 585 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 TMEM178AQ8NBL3 297 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 ZBTB44Q8NCP5 570 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 NPEPL1Q8NDH3 523 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 OR13J1Q8NGT2 312 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 SYAP1Q96A49 352 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 IWS1Q96ST2 819 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 KCNK16Q96T55 309 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 SYT15Q9BQS2 421 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 VN1R1Q9GZP7 353 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 ZMYND12Q9H0C1 365 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 RIMS4Q9H426 269 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 LIN28AQ9H9Z2 209 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 GPN1Q9HCN4 374 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 ZNF71Q9NQZ8 489 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 POLE3Q9NRF9 147 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 PLCXD1Q9NUJ7 323 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 SPASTQ9UBP0 616 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 UBQLN2Q9UHD9 624 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 SLC12A6Q9UHW9 1150 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 TSPAN16Q9UKR8 245 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 ZNF510Q9Y2H8 683 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 CLCA3PQ9Y6N3 262 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 PCDH11YQ9BZA8 1340 aa3.66□□□□□ -1.82
TRAPPC13-209ENST00000508304 IGLV7-46A0A075B6I9 117 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 C2orf92A0A1B0GVN3 265 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 PRSS46E5RG02 174 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 ARPC2O15144 300 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 ATP6V0E1O15342 81 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 MAGEB2O15479 319 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 PRKRAO75569 313 aaKnown RBP3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 ATP6AP2O75787 350 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 CDC123O75794 336 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 ZFAND5O76080 213 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 LETM1O95202 739 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 NADKO95544 446 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 WDPCPO95876 746 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 IFNB1P01574 187 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 RAF1P04049 648 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 FRMD6-AS1P0C7T7 363 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 TRIM49P0CI25 452 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 TRIM49CP0CI26 452 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 UGT1A6P19224 532 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 MARCKSP29966 332 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 RPL21P46778 160 aaKnown RBP3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 SLC6A12P48065 614 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 TKTL1P51854 596 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 HUNKP57058 714 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 ZNF415Q09FC8 603 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 RASGEF1BQ0VAM2 473 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 RIGQ13278 110 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 TSTA3Q13630 321 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 HNRNPDQ14103 355 aaKnown RBP3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 GAMTQ14353 236 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 CA9Q16790 459 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms