RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 SCAMP4Q969E2 229 aa7.17□□□□□ -1.26
PDGFRA-206ENST00000508170 SLC7A6OSQ96CW6 309 aaPredicted RBP7.17□□□□□ -1.26
PDGFRA-206ENST00000508170 KLHDC7BQ96G42 594 aa7.17□□□□□ -1.26
PDGFRA-206ENST00000508170 B3GALT6Q96L58 329 aa7.17□□□□□ -1.26
PDGFRA-206ENST00000508170 MRGPRX2Q96LB1 330 aa7.17□□□□□ -1.26
PDGFRA-206ENST00000508170 MUS81Q96NY9 551 aa7.17□□□□□ -1.26
PDGFRA-206ENST00000508170 CTRCQ99895 268 aa7.17□□□□□ -1.26
PDGFRA-206ENST00000508170 HSD17B14Q9BPX1 270 aa7.17□□□□□ -1.26
PDGFRA-206ENST00000508170 MSTO1Q9BUK6 570 aa7.17□□□□□ -1.26
PDGFRA-206ENST00000508170 TM6SF2Q9BZW4 377 aa7.17□□□□□ -1.26
PDGFRA-206ENST00000508170 WDR55Q9H6Y2 383 aaPredicted RBP7.17□□□□□ -1.26
PDGFRA-206ENST00000508170 LYRM4Q9HD34 91 aa7.17□□□□□ -1.26
PDGFRA-206ENST00000508170 ASAH2Q9NR71 780 aa7.17□□□□□ -1.26
PDGFRA-206ENST00000508170 PLCXD1Q9NUJ7 323 aa7.17□□□□□ -1.26
PDGFRA-206ENST00000508170 ADAMTS5Q9UNA0 930 aa7.17□□□□□ -1.26
PDGFRA-206ENST00000508170 ERGIC3Q9Y282 383 aa7.17□□□□□ -1.26
PDGFRA-206ENST00000508170 A0A0G2JLW4 131 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 SMLR1H3BR10 107 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 DLL1O00548 723 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 MOSPD3O75425 235 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 CNTN5O94779 1100 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 TJP3O95049 919 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 STBD1O95210 358 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 MPIG6BO95866 241 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 ANXA5P08758 320 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 THBS2P35442 1172 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 MMP12P39900 470 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 RAP1GDS1P52306 607 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 NUP107P57740 925 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 RGS8P57771 180 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 VSNL1P62760 191 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 CDH17Q12864 832 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 HLXQ14774 488 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 COQ5Q5HYK3 327 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 TCHHL1Q5QJ38 904 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 ASPHD2Q6ICH7 369 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 SPOPLQ6IQ16 392 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 FAM151BQ6UXP7 276 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 HSDL2Q6YN16 418 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 PROKR2Q8NFJ6 384 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 OR51L1Q8NGJ5 315 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 ESR2Q92731 530 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 BOD1Q96IK1 185 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 Q96M66 194 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 CCT8L2Q96SF2 557 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 TOLLIPQ9H0E2 274 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 SNX25Q9H3E2 840 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 FN3KQ9H479 309 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 RAB18Q9NP72 206 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 SSU72Q9NP77 194 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 BATF3Q9NR55 127 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 RLIMQ9NVW2 624 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 PTTG3PQ9NZH4 202 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 KLQ9UEF7 1012 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 TINAGQ9UJW2 476 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 SLC5A6Q9Y289 635 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 ADGRB2O60241 1585 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 TRAV26-1A0A087WT03 109 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 A0A1B0GW15 77 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 A8MX80 341 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 C9JVG2 144 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 PFKFB2O60825 505 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 PPP1R11O60927 126 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 PSIP1O75475 530 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 FTH1P02794 183 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 MMP3P08254 477 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 GSTM3P21266 225 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 EEF1B2P24534 225 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 STK19P49842 368 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 PPP2CBP62714 309 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 PPP2CAP67775 309 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 RHAGQ02094 409 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 C18orf21Q32NC0 220 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 LRIF1Q5T3J3 769 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 KHDRBS2Q5VWX1 349 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 LIPNQ5VXI9 398 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 TXNDC8Q6A555 127 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 OR5M10Q6IEU7 315 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 PYHIN1Q6K0P9 492 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 RNASEKQ6P5S7 137 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 POLNQ7Z5Q5 900 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 ZFAND4Q86XD8 727 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 CLEC10AQ8IUN9 316 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 SHISA5Q8N114 240 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 METTL25Q8N6Q8 603 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 ZNF655Q8N720 491 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 KIAA0895Q8NCT3 520 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 OR4A16Q8NH70 328 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 ZNF480Q8WV37 535 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 OVCA2Q8WZ82 227 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 NPIPB3Q92617 1050 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 NRGNQ92686 78 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 ZNF775Q96BV0 537 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 ZNF274Q96GC6 653 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 TAAR1Q96RJ0 339 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 FSD1LQ9BXM9 530 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 ATXN3LQ9H3M9 355 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 TPK1Q9H3S4 243 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 GPR35Q9HC97 309 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 KIAA1456Q9P272 454 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms