RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 CLDN17P56750 224 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 STX17P56962 302 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 PSMC6P62333 389 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 RBBP7Q16576 425 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 CCL14Q16627 93 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 PCK2Q16822 640 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 VWC2Q2TAL6 325 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 TEX35Q5T0J7 233 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 ZNF544Q6NX49 715 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 DHRS11Q6UWP2 260 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 ZBTB49Q6ZSB9 765 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 DET1Q7L5Y6 550 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 C5orf24Q7Z6I8 188 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 OR2L5Q8NG80 312 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 PRPF31Q8WWY3 499 aaKnown RBP2.11□□□□□ -2.07
CLOCK-207ENST00000508049 OTUB1Q96FW1 271 aaPredicted RBP2.11□□□□□ -2.07
CLOCK-207ENST00000508049 RBM41Q96IZ5 413 aaKnown RBP2.11□□□□□ -2.07
CLOCK-207ENST00000508049 RCHY1Q96PM5 261 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 HSD17B14Q9BPX1 270 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 ZBP1Q9H171 429 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 OLAHQ9NV23 265 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 EXOC1Q9NV70 894 aa2.11□□□□□ -2.07
CLOCK-207ENST00000508049 NIP7Q9Y221 180 aaKnown RBP eCLIP2.11□□□□□ -2.07
CLOCK-207ENST00000508049 FOXI3A8MTJ6 420 aaPredicted RBP2.1□□□□□ -2.07
CLOCK-207ENST00000508049 ZNF487B1APH4 448 aa2.1□□□□□ -2.07
CLOCK-207ENST00000508049 FBP2O00757 339 aa2.1□□□□□ -2.07
CLOCK-207ENST00000508049 AP5Z1O43299 807 aa2.1□□□□□ -2.07
CLOCK-207ENST00000508049 STAM2O75886 525 aa2.1□□□□□ -2.07
CLOCK-207ENST00000508049 ATP5BP06576 529 aaKnown RBP2.1□□□□□ -2.07
CLOCK-207ENST00000508049 P0C879 139 aa2.1□□□□□ -2.07
CLOCK-207ENST00000508049 AZGP1P25311 298 aaKnown RBP2.1□□□□□ -2.07
CLOCK-207ENST00000508049 PEX3P56589 373 aa2.1□□□□□ -2.07
CLOCK-207ENST00000508049 PTPRCAPQ14761 206 aa2.1□□□□□ -2.07
CLOCK-207ENST00000508049 KIAA0040Q15053 153 aa2.1□□□□□ -2.07
CLOCK-207ENST00000508049 TTC27Q6P3X3 843 aa2.1□□□□□ -2.07
CLOCK-207ENST00000508049 Q6P435 159 aa2.1□□□□□ -2.07
CLOCK-207ENST00000508049 PIGWQ7Z7B1 504 aa2.1□□□□□ -2.07
CLOCK-207ENST00000508049 TEX26Q8N6G2 289 aa2.1□□□□□ -2.07
CLOCK-207ENST00000508049 Q8N9L7 120 aa2.1□□□□□ -2.07
CLOCK-207ENST00000508049 ZNF564Q8TBZ8 553 aaPredicted RBP2.1□□□□□ -2.07
CLOCK-207ENST00000508049 ZBED6CLQ96FA7 236 aaPredicted RBP2.1□□□□□ -2.07
CLOCK-207ENST00000508049 MUS81Q96NY9 551 aa2.1□□□□□ -2.07
CLOCK-207ENST00000508049 LIME1Q9H400 295 aa2.1□□□□□ -2.07
CLOCK-207ENST00000508049 CNOT10Q9H9A5 744 aaKnown RBP2.1□□□□□ -2.07
CLOCK-207ENST00000508049 PLEKHA3Q9HB20 300 aa2.1□□□□□ -2.07
CLOCK-207ENST00000508049 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.1□□□□□ -2.07
CLOCK-207ENST00000508049 TBC1D22BQ9NU19 505 aa2.1□□□□□ -2.07
CLOCK-207ENST00000508049 PPIEQ9UNP9 301 aaKnown RBP2.1□□□□□ -2.07
CLOCK-207ENST00000508049 A6NCN8 305 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 A8MV72 311 aaPredicted RBP2.09□□□□□ -2.07
CLOCK-207ENST00000508049 E2F3O00716 465 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 CLDN4O14493 209 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 KIF5CO60282 957 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 DOK2O60496 412 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 PCGF2P35227 344 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 MECOMQ03112 1051 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 ABRAXAS2Q15018 415 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 PTGISQ16647 500 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 REP15Q6BDI9 236 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 NAA16Q6N069 864 aaPredicted RBP2.09□□□□□ -2.07
CLOCK-207ENST00000508049 TRMT11Q7Z4G4 463 aaKnown RBP2.09□□□□□ -2.07
CLOCK-207ENST00000508049 SLC4A11Q8NBS3 891 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 OR6F1Q8NGZ6 308 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 KIR2DL5BQ8NHK3 375 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 TEKT4Q8WW24 435 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 FRAT1Q92837 279 aaPredicted RBP2.09□□□□□ -2.07
CLOCK-207ENST00000508049 PYCR2Q96C36 320 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 SCRT1Q9BWW7 348 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 FNDC4Q9H6D8 234 aaPredicted RBP2.09□□□□□ -2.07
CLOCK-207ENST00000508049 CYTL1Q9NRR1 136 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 MOKQ9UQ07 419 aa2.09□□□□□ -2.07
CLOCK-207ENST00000508049 LMO7DNF2Z398 122 aa2.08□□□□□ -2.08
CLOCK-207ENST00000508049 H3BMM5 538 aa2.08□□□□□ -2.08
CLOCK-207ENST00000508049 PANO1I0J062 215 aa2.08□□□□□ -2.08
CLOCK-207ENST00000508049 EPB41L2O43491 1005 aaKnown RBP2.08□□□□□ -2.08
CLOCK-207ENST00000508049 TSPAN9O75954 239 aa2.08□□□□□ -2.08
CLOCK-207ENST00000508049 RECQL5O94762 991 aaPredicted RBP2.08□□□□□ -2.08
CLOCK-207ENST00000508049 MT-ND2P03891 347 aa2.08□□□□□ -2.08
CLOCK-207ENST00000508049 STAG3L1P0CL83 205 aa2.08□□□□□ -2.08
CLOCK-207ENST00000508049 MYL6BP14649 208 aa2.08□□□□□ -2.08
CLOCK-207ENST00000508049 CTNNA2P26232 953 aa2.08□□□□□ -2.08
CLOCK-207ENST00000508049 HSD17B3P37058 310 aa2.08□□□□□ -2.08
CLOCK-207ENST00000508049 FNTAP49354 379 aa2.08□□□□□ -2.08
CLOCK-207ENST00000508049 FASTKQ14296 549 aaKnown RBP2.08□□□□□ -2.08
CLOCK-207ENST00000508049 ZNF658BQ4V348 819 aaPredicted RBP2.08□□□□□ -2.08
CLOCK-207ENST00000508049 LACTB2Q53H82 288 aaPredicted RBP2.08□□□□□ -2.08
CLOCK-207ENST00000508049 Q7L0L9 218 aa2.08□□□□□ -2.08
CLOCK-207ENST00000508049 NUFIP2Q7Z417 695 aaKnown RBP2.08□□□□□ -2.08
CLOCK-207ENST00000508049 FBXO16Q8IX29 292 aaPredicted RBP2.08□□□□□ -2.08
CLOCK-207ENST00000508049 PRSS35Q8N3Z0 413 aa2.08□□□□□ -2.08
CLOCK-207ENST00000508049 PCNPQ8WW12 178 aaKnown RBP2.08□□□□□ -2.08
CLOCK-207ENST00000508049 SEPT1Q8WYJ6 367 aa2.08□□□□□ -2.08
CLOCK-207ENST00000508049 TIGD1Q96MW7 591 aa2.08□□□□□ -2.08
CLOCK-207ENST00000508049 PCDHB18PQ96TA0 734 aa2.08□□□□□ -2.08
CLOCK-207ENST00000508049 PIH1D3Q9NQM4 214 aaKnown RBP2.08□□□□□ -2.08
CLOCK-207ENST00000508049 ZNF319Q9P2F9 582 aa2.08□□□□□ -2.08
CLOCK-207ENST00000508049 ZFP37Q9Y6Q3 630 aaPredicted RBP2.08□□□□□ -2.08
CLOCK-207ENST00000508049 CFAP65Q6ZU64 1925 aaKnown RBP2.08□□□□□ -2.08
CLOCK-207ENST00000508049 PINLYPA6NC86 204 aa2.07□□□□□ -2.08
CLOCK-207ENST00000508049 EPOPA6NHQ4 379 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms