RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 GNGT2O14610 69 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 KLF8O95600 359 aaPredicted RBP16.88■□□□□ 0.29
SFXN1-208ENST00000507823 NUDT7P0C024 238 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 PSMB5P28074 263 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 MRPS21P82921 87 aaKnown RBP16.88■□□□□ 0.29
SFXN1-208ENST00000507823 CLCA4Q14CN2 919 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 TTC23Q5W5X9 447 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 CCDC80Q76M96 950 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 ADGRF3Q8IZF5 1079 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 NAGSQ8N159 534 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 ZNF786Q8N393 782 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 TRIML2Q8N7C3 387 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 C11orf65Q8NCR3 313 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 NRBF2Q96F24 287 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 EPS8L2Q9H6S3 715 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 LHX9Q9NQ69 397 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 VNN3Q9NY84 501 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 TAS2R9Q9NYW1 312 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 TAAR2Q9P1P5 351 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 TMEFF2Q9UIK5 374 aaPredicted RBP16.88■□□□□ 0.29
SFXN1-208ENST00000507823 F5P12259 2224 aa16.88■□□□□ 0.29
SFXN1-208ENST00000507823 IGKV1-8A0A0C4DH67 115 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 CACNB4O00305 520 aaPredicted RBP16.87■□□□□ 0.29
SFXN1-208ENST00000507823 CAPN5O15484 640 aaPredicted RBP16.87■□□□□ 0.29
SFXN1-208ENST00000507823 GCM2O75603 506 aaPredicted RBP16.87■□□□□ 0.29
SFXN1-208ENST00000507823 CLIC3O95833 236 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 DDCP20711 480 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 DRD1P21728 446 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 GSTT1P30711 240 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 EEF1A2Q05639 463 aaKnown RBP16.87■□□□□ 0.29
SFXN1-208ENST00000507823 RFX4Q33E94 735 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 CCNYL2Q5T2Q4 361 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 OR2T5Q6IEZ7 315 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 PAGE2Q7Z2X7 111 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.87■□□□□ 0.29
SFXN1-208ENST00000507823 OR2T29Q8NH02 315 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 PNPT1Q8TCS8 783 aaKnown RBP16.87■□□□□ 0.29
SFXN1-208ENST00000507823 CIDECQ96AQ7 238 aaPredicted RBP16.87■□□□□ 0.29
SFXN1-208ENST00000507823 TM4SF18Q96CE8 201 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 QRFPRQ96P65 431 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 TOR3AQ9H497 397 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 SOX17Q9H6I2 414 aaPredicted RBP16.87■□□□□ 0.29
SFXN1-208ENST00000507823 SMURF2Q9HAU4 748 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 FAM118AQ9NWS6 357 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 KCNK6Q9Y257 313 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 C10orf142B7Z368 130 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 H7BY64 318 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 CLEC3AO75596 197 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 ZNF682O95780 498 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 FRKP42685 505 aaPredicted RBP16.87■□□□□ 0.29
SFXN1-208ENST00000507823 SPIDRQ14159 915 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.87■□□□□ 0.29
SFXN1-208ENST00000507823 RBM44Q6ZP01 1051 aaKnown RBP16.87■□□□□ 0.29
SFXN1-208ENST00000507823 SMRP1Q8NCR6 262 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 HSH2DQ96JZ2 352 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 C7orf34Q96L11 122 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 PRAP1Q96NZ9 151 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 SLC35A5Q9BS91 424 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 SARGQ9BW04 601 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 RAD21L1Q9H4I0 556 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 C1GALT1Q9NS00 363 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 ABCG2Q9UNQ0 655 aa16.87■□□□□ 0.29
SFXN1-208ENST00000507823 PPP2CBP62714 309 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 PPP2CAP67775 309 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 SPESP1Q6UW49 350 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 ZNF852Q6ZMS4 543 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 OFCC1Q8IZS5 231 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 HS3ST5Q8IZT8 346 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 GALNT15Q8N3T1 639 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 CREB3L4Q8TEY5 395 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 ZFAND2BQ8WV99 257 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 F2RL3Q96RI0 385 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 SORBS1Q9BX66 1292 aaKnown RBP16.86■□□□□ 0.29
SFXN1-208ENST00000507823 AMBRA1Q9C0C7 1298 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 SLC6A16Q9GZN6 736 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 PLEKHM1Q9Y4G2 1056 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 TRBC2A0A5B9 178 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 SLC16A6O15403 523 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 NOBOXO60393 691 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 FABP3P05413 133 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 GSTM2P28161 218 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 ITGA1P56199 1179 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 WASH2PQ6VEQ5 465 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 UBE3DQ7Z6J8 389 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 DCP2Q8IU60 420 aaKnown RBP16.86■□□□□ 0.29
SFXN1-208ENST00000507823 TTLQ8NG68 377 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 MUS81Q96NY9 551 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 OSGEPL1Q9H4B0 414 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 C8orf33Q9H7E9 229 aaPredicted RBP16.86■□□□□ 0.29
SFXN1-208ENST00000507823 DDX31Q9H8H2 851 aaKnown RBP16.86■□□□□ 0.29
SFXN1-208ENST00000507823 FGF22Q9HCT0 170 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 SPASTQ9UBP0 616 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 C3orf18Q9UK00 162 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 FAF1Q9UNN5 650 aaPredicted RBP16.86■□□□□ 0.29
SFXN1-208ENST00000507823 CEPT1Q9Y6K0 416 aa16.86■□□□□ 0.29
SFXN1-208ENST00000507823 TBC1D3DA0A087WVF3 549 aa16.85■□□□□ 0.29
SFXN1-208ENST00000507823 TBC1D3IA0A087WXS9 549 aa16.85■□□□□ 0.29
SFXN1-208ENST00000507823 TBC1D3EA0A087X179 549 aa16.85■□□□□ 0.29
SFXN1-208ENST00000507823 TBC1D3KA0A087X1G2 549 aa16.85■□□□□ 0.29
SFXN1-208ENST00000507823 A0A1W2PRB8 838 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms