RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 SERINC2Q96SA4 455 aa19.07■□□□□ 0.64
USP53-203ENST00000507597 MACROD1Q9BQ69 325 aa19.07■□□□□ 0.64
USP53-203ENST00000507597 SPRY4Q9C004 299 aa19.07■□□□□ 0.64
USP53-203ENST00000507597 OR51B5Q9H339 312 aa19.07■□□□□ 0.64
USP53-203ENST00000507597 LHX9Q9NQ69 397 aa19.07■□□□□ 0.64
USP53-203ENST00000507597 SPTBN4Q9H254 2564 aa19.07■□□□□ 0.64
USP53-203ENST00000507597 LYPLA1O75608 230 aaPredicted RBP19.06■□□□□ 0.64
USP53-203ENST00000507597 MYO1DO94832 1006 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 KLHL18O94889 574 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 ALBP02768 609 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 STATHP02808 62 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 CTSBP07858 339 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 SMIM10L1P0DMW3 83 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 ZNF28P17035 718 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 FBLP22087 321 aaKnown RBP19.06■□□□□ 0.64
USP53-203ENST00000507597 RORAP35398 523 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 SSR2P43308 183 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 RAB8AP61006 207 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 RPS15P62841 145 aaKnown RBP19.06■□□□□ 0.64
USP53-203ENST00000507597 BTN3A2P78410 334 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 OCA2Q04671 838 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 HYAL2Q12891 473 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 ABRAXAS2Q15018 415 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 SPIN4Q56A73 249 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 PRAMEF17Q5VTA0 474 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 C1orf189Q5VU69 101 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 CLEC6AQ6EIG7 209 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 OR4C11Q6IEV9 310 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 ABHD17CQ6PCB6 329 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 RGS9BPQ6ZS82 235 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 WDR75Q8IWA0 830 aaKnown RBP19.06■□□□□ 0.64
USP53-203ENST00000507597 ZNF781Q8N8C0 355 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 AGR3Q8TD06 166 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 ADAMTS18Q8TE60 1221 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 TWIST2Q8WVJ9 160 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 SMIM10Q96HG1 83 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 C7orf26Q96N11 449 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 F2RL3Q96RI0 385 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 KCNA7Q96RP8 456 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 YIPF2Q9BWQ6 316 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 KCND3Q9UK17 655 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 ADAM29Q9UKF5 820 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 NXT1Q9UKK6 140 aaKnown RBP19.06■□□□□ 0.64
USP53-203ENST00000507597 PADI2Q9Y2J8 665 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 NAALAD2Q9Y3Q0 740 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 ADAMTS20P59510 1910 aa19.06■□□□□ 0.64
USP53-203ENST00000507597 A0A0A6YYC8 382 aaPredicted RBP19.05■□□□□ 0.64
USP53-203ENST00000507597 TRPC5OSA6NMA1 111 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 C21orf140B9A014 251 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 I3L1I5 382 aaPredicted RBP19.05■□□□□ 0.64
USP53-203ENST00000507597 GALR3O60755 368 aaPredicted RBP19.05■□□□□ 0.64
USP53-203ENST00000507597 GUCY1B2O75343 617 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 RSL1D1O76021 490 aaKnown RBP19.05■□□□□ 0.64
USP53-203ENST00000507597 ONECUT2O95948 504 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 IL1RNP18510 177 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 ITGAXP20702 1163 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 SERPINB3P29508 390 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 HNRNPH1P31943 449 aaKnown RBP19.05■□□□□ 0.64
USP53-203ENST00000507597 FOXA1P55317 472 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 DSG2Q14126 1118 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 DEFB134Q4QY38 66 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 SPDYAQ5MJ70 313 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 NUDT13Q86X67 352 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 ZFAND4Q86XD8 727 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 ARHGEF39Q8N4T4 335 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 C7orf57Q8NEG2 295 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 PIWIL2Q8TC59 973 aaKnown RBP19.05■□□□□ 0.64
USP53-203ENST00000507597 PMEPA1Q969W9 287 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 FKBP10Q96AY3 582 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 GPR87Q9BY21 358 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 DPH1Q9BZG8 443 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 KLHL31Q9H511 634 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 MKKSQ9NPJ1 570 aaPredicted RBP19.05■□□□□ 0.64
USP53-203ENST00000507597 FARSBQ9NSD9 589 aaKnown RBP19.05■□□□□ 0.64
USP53-203ENST00000507597 MS4A12Q9NXJ0 267 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 MAP4K5Q9Y4K4 846 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 DNAJC15Q9Y5T4 150 aa19.05■□□□□ 0.64
USP53-203ENST00000507597 MED19A0JLT2 244 aaPredicted RBP19.04■□□□□ 0.64
USP53-203ENST00000507597 TMEM8BA6NDV4 472 aa19.04■□□□□ 0.64
USP53-203ENST00000507597 PSMD12O00232 456 aaPredicted RBP19.04■□□□□ 0.64
USP53-203ENST00000507597 RRP8O43159 456 aaKnown RBP19.04■□□□□ 0.64
USP53-203ENST00000507597 FOXS1O43638 330 aa19.04■□□□□ 0.64
USP53-203ENST00000507597 VPS4BO75351 444 aa19.04■□□□□ 0.64
USP53-203ENST00000507597 RAB40ALP0C0E4 278 aa19.04■□□□□ 0.64
USP53-203ENST00000507597 MDH1P40925 334 aaKnown RBP19.04■□□□□ 0.64
USP53-203ENST00000507597 OCRLQ01968 901 aa19.04■□□□□ 0.64
USP53-203ENST00000507597 ACSM2AQ08AH3 577 aa19.04■□□□□ 0.64
USP53-203ENST00000507597 SLC9A5Q14940 896 aa19.04■□□□□ 0.64
USP53-203ENST00000507597 TUBB8Q3ZCM7 444 aa19.04■□□□□ 0.64
USP53-203ENST00000507597 ACSM2BQ68CK6 577 aa19.04■□□□□ 0.64
USP53-203ENST00000507597 CYP20A1Q6UW02 462 aa19.04■□□□□ 0.64
USP53-203ENST00000507597 PARP9Q8IXQ6 854 aa19.04■□□□□ 0.64
USP53-203ENST00000507597 OR9A4Q8NGU2 314 aa19.04■□□□□ 0.64
USP53-203ENST00000507597 PPP3R2Q96LZ3 170 aa19.04■□□□□ 0.64
USP53-203ENST00000507597 SORT1Q99523 831 aa19.04■□□□□ 0.64
USP53-203ENST00000507597 SYNPO2LQ9H987 977 aa19.04■□□□□ 0.64
USP53-203ENST00000507597 ZNF282Q9UDV7 671 aaPredicted RBP19.04■□□□□ 0.64
USP53-203ENST00000507597 MRPS33Q9Y291 106 aaKnown RBP19.04■□□□□ 0.64
USP53-203ENST00000507597 KIF26BQ2KJY2 2108 aa19.04■□□□□ 0.64
USP53-203ENST00000507597 HDAC3O15379 428 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms