RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 CDC123O75794 336 aaPredicted RBP5.28□□□□□ -1.56
HERC4-213ENST00000506515 NADKO95544 446 aaPredicted RBP5.28□□□□□ -1.56
HERC4-213ENST00000506515 FAM157CP0CG43 387 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 SSTR1P30872 391 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 SFTPDP35247 375 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 CETN2P41208 172 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 DNA2P51530 1060 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 FKBP1BP68106 108 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 SP3Q02447 781 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 PDLIM3Q53GG5 364 aaPredicted RBP5.28□□□□□ -1.56
HERC4-213ENST00000506515 XKR6Q5GH73 641 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 FFAR4Q5NUL3 377 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 FAM46CQ5VWP2 391 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 CST9Q5W186 159 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 FAM53AQ6NSI3 398 aaPredicted RBP5.28□□□□□ -1.56
HERC4-213ENST00000506515 LINC00696Q6ZRV3 163 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 CUZD1Q86UP6 607 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.28□□□□□ -1.56
HERC4-213ENST00000506515 TMEM178AQ8NBL3 297 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 DBF4BQ8NFT6 615 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 OR7A2PQ8NGA2 310 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 NCOA7Q8NI08 942 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 AFAP1L1Q8TED9 768 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 GRK7Q8WTQ7 553 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 DCPSQ96C86 337 aaKnown RBP5.28□□□□□ -1.56
HERC4-213ENST00000506515 SGF29Q96ES7 293 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 KLHL5Q96PQ7 755 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 DNAI2Q9GZS0 605 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 LSG1Q9H089 658 aaKnown RBP5.28□□□□□ -1.56
HERC4-213ENST00000506515 FAM49AQ9H0Q0 323 aaPredicted RBP5.28□□□□□ -1.56
HERC4-213ENST00000506515 TMEM206Q9H813 350 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 RNF121Q9H920 327 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 TUFT1Q9NNX1 390 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 TRPM7Q96QT4 1865 aa5.28□□□□□ -1.56
HERC4-213ENST00000506515 RNF123Q5XPI4 1314 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 SNURFLB1AK76 121 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 KLF11O14901 512 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 EXTL3O43909 919 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 BBOX1O75936 387 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 CDK2AP2O75956 126 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 HMBSP08397 361 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 PATE4P0C8F1 98 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 GP1BBP13224 206 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 F3P13726 295 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 HOXB6P17509 224 aaKnown RBP5.27□□□□□ -1.57
HERC4-213ENST00000506515 COL5A3P25940 1745 aaPredicted RBP5.27□□□□□ -1.57
HERC4-213ENST00000506515 CCND3P30281 292 aaPredicted RBP5.27□□□□□ -1.57
HERC4-213ENST00000506515 HUNKP57058 714 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 IL10RBQ08334 325 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 RBM39Q14498 530 aaKnown RBP5.27□□□□□ -1.57
HERC4-213ENST00000506515 KLHL22Q53GT1 634 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 TTC27Q6P3X3 843 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 FUT10Q6P4F1 479 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 PRSS55Q6UWB4 352 aaPredicted RBP5.27□□□□□ -1.57
HERC4-213ENST00000506515 CREBRFQ8IUR6 639 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 NIPA2Q8N8Q9 360 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 LRTM2Q8N967 370 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 TRIM58Q8NG06 486 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 TEKT1Q969V4 418 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 HNRNPABQ99729 332 aaKnown RBP5.27□□□□□ -1.57
HERC4-213ENST00000506515 PIGQQ9BRB3 760 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 FSD1Q9BTV5 496 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 FUT8Q9BYC5 575 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 ABCB8Q9NUT2 735 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 OR6C2Q9NZP2 312 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 PPP2R2CQ9Y2T4 447 aa5.27□□□□□ -1.57
HERC4-213ENST00000506515 TIAM2Q8IVF5 1701 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 AFDNP55196 1824 aaKnown RBP5.26□□□□□ -1.57
HERC4-213ENST00000506515 TRBV5-5A0A0J9YX44 114 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 TMEM150CB9EJG8 249 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 KBTBD13C9JR72 458 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 EML2O95834 649 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 MOCS2O96007 188 aaPredicted RBP5.26□□□□□ -1.57
HERC4-213ENST00000506515 ATP1B1P05026 303 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 CAPN2P17655 700 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 ITIH1P19827 911 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 ANOS1P23352 680 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 CDKN1AP38936 164 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 NPBWR1P48145 328 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 MYL7Q01449 175 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 EXT1Q16394 746 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 ZNF674Q2M3X9 581 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 IQCCQ4KMZ1 466 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 ZNF790Q6PG37 636 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 IYDQ6PHW0 289 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 USP43Q70EL4 1123 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 SNX32Q86XE0 403 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 APLFQ8IW19 511 aaPredicted RBP5.26□□□□□ -1.57
HERC4-213ENST00000506515 SLC37A3Q8NCC5 494 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 GPRC5AQ8NFJ5 357 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 OR7G3Q8NG95 312 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 PIK3R3Q92569 461 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 CENPTQ96BT3 561 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 ZNF501Q96CX3 271 aaPredicted RBP5.26□□□□□ -1.57
HERC4-213ENST00000506515 PRAC1Q96KF2 57 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 F2RL3Q96RI0 385 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 THAP2Q9H0W7 228 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 ATP13A3Q9H7F0 1226 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 ZNF71Q9NQZ8 489 aaPredicted RBP5.26□□□□□ -1.57
HERC4-213ENST00000506515 MAN1B1Q9UKM7 699 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms