RNA–Protein interactions for RNA: ENST00000506188.5

SNHG4-203, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-203ENST00000506188 PTBP2Q9UKA9 531 aaKnown RBP13.23□□□□□ -0.29
SNHG4-203ENST00000506188 TNPO3Q9Y5L0 923 aaKnown RBP13.23□□□□□ -0.29
SNHG4-203ENST00000506188 SPACA6W5XKT8 324 aa13.23□□□□□ -0.29
SNHG4-203ENST00000506188 A0A096LPK6 155 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 ERI3O43414 337 aaKnown RBP13.22□□□□□ -0.29
SNHG4-203ENST00000506188 CDC123O75794 336 aaPredicted RBP13.22□□□□□ -0.29
SNHG4-203ENST00000506188 SEC24DO94855 1032 aaPredicted RBP13.22□□□□□ -0.29
SNHG4-203ENST00000506188 WISP3O95389 354 aaPredicted RBP13.22□□□□□ -0.29
SNHG4-203ENST00000506188 ACSL3O95573 720 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 C2P06681 752 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 SLC35E2BP0CK96 405 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 CNTFP26441 200 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 TSFMP43897 325 aaKnown RBP13.22□□□□□ -0.29
SNHG4-203ENST00000506188 PIK3CGP48736 1102 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 PHEXP78562 749 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 ZNF33BQ06732 778 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 PCOLCEQ15113 449 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 TBCCQ15814 346 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 SFT2D3Q587I9 215 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 FAM180AQ6UWF9 173 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 CHSY3Q70JA7 882 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 ANKRD37Q7Z713 158 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 CMC1Q7Z7K0 106 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 ISCA2Q86U28 154 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 PDSS2Q86YH6 399 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 TMEM151BQ8IW70 566 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 CYP4X1Q8N118 509 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 SLC5A8Q8N695 610 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 SIRT6Q8N6T7 355 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 HORMAD2Q8N7B1 307 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 ANKRD53Q8N9V6 530 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 OR1N1Q8NGS0 311 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 M1APQ8TC57 530 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 HAS2Q92819 552 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 SNRNP40Q96DI7 357 aaKnown RBP13.22□□□□□ -0.29
SNHG4-203ENST00000506188 IMMP1LQ96LU5 166 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 REXO4Q9GZR2 422 aaKnown RBP13.22□□□□□ -0.29
SNHG4-203ENST00000506188 VPS11Q9H270 941 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 RHBGQ9H310 441 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 KCNK13Q9HB14 408 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 TMCO1Q9UM00 188 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 SEC16AO15027 2179 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 SPTBP11277 2137 aa13.22□□□□□ -0.29
SNHG4-203ENST00000506188 A0A087WUV0 522 aaPredicted RBP13.21□□□□□ -0.29
SNHG4-203ENST00000506188 LRIT2A6NDA9 550 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 K7EPI3 171 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 AGFG2O95081 481 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 KLHL2O95198 593 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 RBP1P09455 135 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 GNLYP22749 145 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 Q0VFX4 171 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 CHIT1Q13231 466 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 DOC2AQ14183 400 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 C18orf21Q32NC0 220 aaPredicted RBP13.21□□□□□ -0.29
SNHG4-203ENST00000506188 MED27Q6P2C8 311 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 PAPD4Q6PIY7 484 aaKnown RBP13.21□□□□□ -0.29
SNHG4-203ENST00000506188 MYLK4Q86YV6 388 aaPredicted RBP13.21□□□□□ -0.29
SNHG4-203ENST00000506188 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.21□□□□□ -0.295e-6■■■□□ 17.5
SNHG4-203ENST00000506188 Q8NA96 180 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 OR2L5Q8NG80 312 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 OR5T3Q8NGG3 340 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 NXNL1Q96CM4 212 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 REPS1Q96D71 796 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 RBCK1Q9BYM8 510 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 ZBTB20Q9HC78 741 aaPredicted RBP13.21□□□□□ -0.29
SNHG4-203ENST00000506188 PRDM9Q9NQV7 894 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 SNX15Q9NRS6 342 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 NINJ2Q9NZG7 142 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 PCDHGA10Q9Y5H3 936 aa13.21□□□□□ -0.29
SNHG4-203ENST00000506188 BOD1L1Q8NFC6 3051 aa13.21□□□□□ -0.3
SNHG4-203ENST00000506188 CDK2AP1O14519 115 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 TAPBPO15533 448 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 C1QAP02745 245 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 KCNC1P48547 511 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 PLA2G16P53816 162 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 OLR1P78380 273 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 BMPR2Q13873 1038 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 EFTUD2Q15029 972 aaKnown RBP eCLIP13.2□□□□□ -0.31e-9■■■■■ 35.4
SNHG4-203ENST00000506188 INAQ16352 499 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 MEP1AQ16819 746 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 TSNAXIP1Q2TAA8 658 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 TMEM35AQ53FP2 167 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 RPUSD3Q6P087 351 aaKnown RBP13.2□□□□□ -0.3
SNHG4-203ENST00000506188 METTL2BQ6P1Q9 378 aaKnown RBP13.2□□□□□ -0.3
SNHG4-203ENST00000506188 QSOX2Q6ZRP7 698 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 LANCL3Q6ZV70 420 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 CUZD1Q86UP6 607 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 BCORP1Q8N888 145 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 NOA1Q8NC60 698 aaKnown RBP13.2□□□□□ -0.3
SNHG4-203ENST00000506188 PRR7Q8TB68 274 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 CREB3L4Q8TEY5 395 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 ATP6V1E2Q96A05 226 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 ESAMQ96AP7 390 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 WDR34Q96EX3 536 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 KCNC2Q96PR1 638 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 SERINC2Q96SA4 455 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 CCDC77Q9BR77 488 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 TMEM79Q9BSE2 394 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 RNF32Q9H0A6 362 aa13.2□□□□□ -0.3
SNHG4-203ENST00000506188 SPNS1Q9H2V7 528 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms